Genome-Mined Diels-Alderase Catalyzes Formation of the cis-Octahydrodecalins of Varicidin A and B

J Am Chem Soc. 2019 Jan 16;141(2):769-773. doi: 10.1021/jacs.8b12010. Epub 2019 Jan 8.

Abstract

Pericyclases are an emerging family of enzymes catalyzing pericyclic reactions. A class of lipocalin-like enzymes recently characterized as Diels-Alderases (DAses) catalyze decalin formation through intramolecular Diels-Alder (IMDA) reactions between electron-rich dienes and electron-deficient dienophiles. Using this class of enzyme as a beacon for genome mining, we discovered a biosynthetic gene cluster from Penicillium variabile and identified that it encodes for the biosynthesis of varicidin A (1), a new antifungal natural product containing a cis-octahydrodecalin core. Biochemical analysis reveals a carboxylative deactivation strategy used in varicidin biosynthesis to suppress the nonenzymatic IMDA reaction of an early acyclic intermediate that favors trans-decalin formation. A P450 oxidizes the reactive intermediate to yield a relatively unreactive combination of an electron-deficient diene and an electron-deficient dienophile. The DAse PvhB catalyzes the final stage IMDA on the carboxylated intermediate to form the cis-decalin that is important for the antifungal activity.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Antifungal Agents / metabolism*
  • Antifungal Agents / pharmacology
  • Aspergillus nidulans / genetics
  • Candida albicans / drug effects
  • Carbon-Carbon Lyases / chemistry*
  • Carbon-Carbon Lyases / genetics
  • Cycloaddition Reaction
  • Escherichia coli / genetics
  • Genetic Engineering
  • Microbial Sensitivity Tests
  • Multigene Family
  • Naphthalenes / metabolism*
  • Naphthalenes / pharmacology
  • Penicillium / enzymology
  • Saccharomyces cerevisiae / genetics

Substances

  • Antifungal Agents
  • Naphthalenes
  • Carbon-Carbon Lyases