Functional characterization of IRF8 regulation of type II IFN in golden pompano (Trachinotus ovatus)

Fish Shellfish Immunol. 2019 Nov:94:1-9. doi: 10.1016/j.fsi.2019.08.060. Epub 2019 Aug 26.

Abstract

Interferon regulatory factor 8 (IRF8) increases type I IFN transcription levels by binding to IFN promoters, thereby playing a role in innate immunity. Nevertheless, the detailed mechanism through which IRF8 regulates type II IFN in fish remains ambiguous. In the present study, two genes from the golden pompano (Trachinotus ovatus), IRF8 (ToIRF8) and IFN gamma (ToIFNγ), were identified in the IFN/IRF-based signalling pathway. The full-length ToIRF8 cDNA was composed of 2,141 bp and encoded a 421 amino acid polypeptide; the genomic DNA was 2,917 bp in length and consisted of 8 exons and 7 introns. The putative protein showed the highest sequence identity (90-92%) with fish IRF8 and possessed a DNA-binding domain (DBD), an IRF-association domain (IAD) and a nuclear localization signal (NLS) motif consistent with those of IRF8 in other vertebrates. Furthermore, the ToIRF8 transcripts were expressed in all examined tissues of healthy fish, with higher levels observed in the central nervous and immune relevant tissues. They were upregulated by polyinosinic acid: polycytidylic acid [poly (I: C)], lipopolysaccharide (LPS) and flagellin treatments in the blood, liver, intestine and kidney. The results from assays of subcellular localization showed that ToIRF8 was localized to the cytoplasm. Moreover, to investigate whether ToIRF8 was a regulator of ToIFNγ, a promoter analysis was performed using progressive deletion mutations of ToIFNγ. The results indicated that the region from -601 bp to -468 bp includes the core promoter. Mutation analyses indicated that the activity of the ToIFNγ promoter significantly decreased after the targeted mutation of the M1-M3 binding sites. Additionally, overexpressed ToIRF8 in vitro notably increased the expression of several IFN/IRF-based signalling pathway genes. These results suggest that IRF8 is vital in the defence of T. ovatus against bacterial infection and contributes to a better understanding of the transcriptional mechanisms of ToIRF8 on type II IFN in fish.

Keywords: IFNγ; IRF8; Promoter activity; Trachinotus ovatus; Transcription factor.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Fish Diseases / immunology*
  • Fish Proteins / chemistry
  • Fish Proteins / genetics
  • Fish Proteins / immunology
  • Fishes / genetics*
  • Fishes / immunology*
  • Flagellin / pharmacology
  • Gene Expression Profiling / veterinary
  • Gene Expression Regulation / immunology*
  • Immunity, Innate / genetics*
  • Interferon Regulatory Factors / chemistry
  • Interferon Regulatory Factors / genetics*
  • Interferon Regulatory Factors / immunology*
  • Lipopolysaccharides / pharmacology
  • Phylogeny
  • Poly I-C / pharmacology
  • Sequence Alignment / veterinary

Substances

  • Fish Proteins
  • Interferon Regulatory Factors
  • Lipopolysaccharides
  • interferon regulatory factor-8
  • Flagellin
  • Poly I-C