An internal deletion of ADAR rescued by MAVS deficiency leads to a minute phenotype

Nucleic Acids Res. 2020 Apr 6;48(6):3286-3303. doi: 10.1093/nar/gkaa025.

Abstract

The RNA-editing protein ADAR is essential for early development in the mouse. Genetic evidence suggests that A to I editing marks endogenous RNAs as 'self'. Today, different Adar knockout alleles have been generated that show a common phenotype of apoptosis, liver disintegration, elevated immune response and lethality at E12.5. All the Adar knockout alleles can be rescued by a concomitant deletion of the innate immunity genes Mavs or Ifih1 (MDA5), albeit to different extents. This suggests multiple functions of ADAR. We analyze AdarΔ7-9 mice that show a unique growth defect phenotype when rescued by Mavs. We show that AdarΔ7-9 can form a truncated, unstable, editing deficient protein that is mislocalized. Histological and hematologic analysis of these mice indicate multiple tissue- and hematopoietic defects. Gene expression profiling shows dysregulation of Rps3a1 and Rps3a3 in rescued AdarΔ7-9. Consistently, a distortion in 40S and 60S ribosome ratios is observed in liver cells. This dysregulation is also seen in AdarΔ2-13; Mavs-/- but not in AdarE861A/E861A; Ifih1-/- mice, suggesting editing-independent functions of ADAR in regulating expression levels of Rps3a1 and Rps3a3. In conclusion, our study demonstrates the importance of ADAR in post-natal development which cannot be compensated by ADARB1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics
  • Adenosine Deaminase / genetics*
  • Alleles
  • Animals
  • Gene Expression Regulation / genetics
  • Immunity, Innate / genetics*
  • Interferon-Induced Helicase, IFIH1 / genetics*
  • Liver / metabolism
  • Mice
  • Mice, Knockout
  • RNA Editing / genetics
  • RNA-Binding Proteins / genetics
  • Ribosomal Proteins / genetics*
  • Ribosome Subunits, Large, Eukaryotic / genetics
  • Ribosome Subunits, Small, Eukaryotic / genetics
  • Sequence Deletion / genetics

Substances

  • Adaptor Proteins, Signal Transducing
  • IPS-1 protein, mouse
  • RNA-Binding Proteins
  • Ribosomal Proteins
  • Rsp3a1 protein, mouse
  • ADARB1 protein, mouse
  • ADAR1 protein, mouse
  • Adenosine Deaminase
  • Ifih1 protein, mouse
  • Interferon-Induced Helicase, IFIH1