SEUSS integrates transcriptional and epigenetic control of root stem cell organizer specification

EMBO J. 2020 Oct 15;39(20):e105047. doi: 10.15252/embj.2020105047. Epub 2020 Sep 14.

Abstract

Proper regulation of homeotic gene expression is critical for stem cell fate in both plants and animals. In Arabidopsis thaliana, the WUSCHEL (WUS)-RELATED HOMEOBOX 5 (WOX5) gene is specifically expressed in a group of root stem cell organizer cells called the quiescent center (QC) and plays a central role in QC specification. Here, we report that the SEUSS (SEU) protein, homologous to the animal LIM-domain binding (LDB) proteins, assembles a functional transcriptional complex that regulates WOX5 expression and QC specification. SEU is physically recruited to the WOX5 promoter by the master transcription factor SCARECROW. Subsequently, SEU physically recruits the SET domain methyltransferase SDG4 to the WOX5 promoter, thus activating WOX5 expression. Thus, analogous to its animal counterparts, SEU acts as a multi-adaptor protein that integrates the actions of genetic and epigenetic regulators into a concerted transcriptional program to control root stem cell organizer specification.

Keywords: SCARECROW; SEUSS; WOX5; QC specification; transcriptional regulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / embryology
  • Arabidopsis / genetics
  • Arabidopsis / metabolism*
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism*
  • Cell Differentiation / genetics
  • Epigenesis, Genetic
  • Gene Expression Regulation, Plant / genetics
  • Histones / metabolism
  • Homeodomain Proteins / genetics
  • Homeodomain Proteins / metabolism*
  • Methyltransferases / genetics
  • Methyltransferases / metabolism
  • Mutation
  • Plant Roots / metabolism*
  • Promoter Regions, Genetic
  • Protein Domains
  • Signal Transduction
  • Stem Cell Niche / genetics
  • Stem Cell Niche / physiology
  • Stem Cells / metabolism*

Substances

  • Arabidopsis Proteins
  • Histones
  • Homeodomain Proteins
  • SCR protein, Arabidopsis
  • SEUSS protein, Arabidopsis
  • WUSCHEL protein, Arabidopsis
  • histone H3 trimethyl Lys4
  • Methyltransferases