Single molecule analysis indicates stimulation of MUTYH by UV-DDB through enzyme turnover

Nucleic Acids Res. 2021 Aug 20;49(14):8177-8188. doi: 10.1093/nar/gkab591.

Abstract

The oxidative base damage, 8-oxo-7,8-dihydroguanine (8-oxoG) is a highly mutagenic lesion because replicative DNA polymerases insert adenine (A) opposite 8-oxoG. In mammalian cells, the removal of A incorporated across from 8-oxoG is mediated by the glycosylase MUTYH during base excision repair (BER). After A excision, MUTYH binds avidly to the abasic site and is thus product inhibited. We have previously reported that UV-DDB plays a non-canonical role in BER during the removal of 8-oxoG by 8-oxoG glycosylase, OGG1 and presented preliminary data that UV-DDB can also increase MUTYH activity. In this present study we examine the mechanism of how UV-DDB stimulates MUTYH. Bulk kinetic assays show that UV-DDB can stimulate the turnover rate of MUTYH excision of A across from 8-oxoG by 4-5-fold. Electrophoretic mobility shift assays and atomic force microscopy suggest transient complex formation between MUTYH and UV-DDB, which displaces MUTYH from abasic sites. Using single molecule fluorescence analysis of MUTYH bound to abasic sites, we show that UV-DDB interacts directly with MUTYH and increases the mobility and dissociation rate of MUTYH. UV-DDB decreases MUTYH half-life on abasic sites in DNA from 8800 to 590 seconds. Together these data suggest that UV-DDB facilitates productive turnover of MUTYH at abasic sites during 8-oxoG:A repair.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenine / chemistry
  • Animals
  • DNA Damage / drug effects*
  • DNA Damage / radiation effects
  • DNA Glycosylases / genetics*
  • DNA Repair / drug effects
  • DNA Repair / radiation effects
  • DNA Replication / drug effects
  • DNA Replication / radiation effects
  • Guanine / analogs & derivatives*
  • Guanine / chemistry
  • Guanine / pharmacology
  • Guanine / toxicity
  • Hydrocarbons, Chlorinated / pharmacology
  • Hydrocarbons, Chlorinated / toxicity
  • Mice
  • Oxidative Stress / drug effects*
  • Oxidative Stress / radiation effects
  • Single Molecule Imaging

Substances

  • 7,8-dihydro-8-oxoguanine
  • Hydrocarbons, Chlorinated
  • 8-hydroxyguanine
  • Guanine
  • DDB
  • DNA Glycosylases
  • mutY adenine glycosylase
  • Adenine