Multiple G-quadruplexes in the LMNA promoter regulate LMNA variant 6 transcription and promote colon cancer cell growth

Biochim Biophys Acta Gene Regul Mech. 2021 Oct;1864(10):194746. doi: 10.1016/j.bbagrm.2021.194746. Epub 2021 Aug 20.

Abstract

Lamin A/C proteins, major components of the nuclear lamina, are encoded by the LMNA gene. These proteins have multiple cellular functions, including DNA transcription and replication, chromatin organization, regulation of the cell cycle, and apoptosis. Mutations in LMNA are associated with a variety of diseases called laminopathies. LMNA has implications in cancer; however, its mechanisms of dysregulation in cancer cells are not yet fully understood. In this study, among the LMNA transcript variants, we focused on a transcriptional variant 6 (termed LMNA-V6), which contains unique 3 exons upstream of exon 1 of LMNA. The promoter region of LMNA-V6 formed multiple G-quadruplexes and increased its transcriptional activity. Moreover, LMNA-V6 negatively regulated other LMNA mRNA variants, lamin A and lamin C, via direct interaction with their promoter. Knockdown of LMNA-V6 decreased the proliferation of colon cancer cells, whereas overexpression of the unique 3 exons of LMNA-V6 increased cell growth. Furthermore, microarray gene expression profiling showed that alteration of LMNA-V6 levels influenced the expression of p53 in colon cancer cells. Taken together, the results suggest that LMNA-V6 may be a novel functional RNA whose expression is regulated through multiple G-quadruplexes in colon cancer cells.

Keywords: G-quadruplex; LMNA; LMNA-V6; Transcription; colon cancer.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line, Tumor
  • Cell Proliferation / genetics
  • Colonic Neoplasms / genetics*
  • Colonic Neoplasms / metabolism
  • G-Quadruplexes*
  • Gene Expression Regulation, Neoplastic*
  • Humans
  • Lamin Type A / genetics*
  • Lamin Type A / metabolism
  • Promoter Regions, Genetic*
  • RNA Isoforms / genetics
  • RNA Isoforms / metabolism
  • RNA Splicing
  • Transcription, Genetic

Substances

  • LMNA protein, human
  • Lamin Type A
  • RNA Isoforms