A novel missense COL9A3 variant in a pedigree with multiple lumbar disc herniation

J Orthop Surg Res. 2024 Jan 3;19(1):19. doi: 10.1186/s13018-023-04481-2.

Abstract

Trp3 allele in COL9A3 gene has been widely studied in populations with intervertebral disc disease. We identified a novel pathogenic variant in COL9A3 gene in a pedigree with multiple lumbar disc herniation (LDH). The proband was a 14-year-old boy who developed LDH at the L4/5 and L5/S1 spinal segments. His father, paternal aunt and grandfather were diagnosed with LDH at an age of 35, 30 and 23, respectively. By applying whole exome sequencing, a heterozygous missense variant (c.1150C > T, p.Arg384Trp) in COL9A3 was identified. According to the ACMG guidelines, this variant is predicted to be pathogenic. In addition, prediction tools found COL9A3 protein of this variant a reduced stability, some changed charge properties, and an altered spatial conformation. Findings expanded the mutational spectrum of LDH and contributed to the understanding of COL9A3 in the pathogenesis of LDH.

Publication types

  • Case Reports

MeSH terms

  • Adolescent
  • Collagen Type IX* / genetics
  • Humans
  • Intervertebral Disc Degeneration* / pathology
  • Intervertebral Disc Displacement* / diagnostic imaging
  • Intervertebral Disc Displacement* / genetics
  • Lumbar Vertebrae / diagnostic imaging
  • Lumbar Vertebrae / pathology
  • Male
  • Mutation
  • Pedigree
  • Spine

Substances

  • COL9A3 protein, human
  • Collagen Type IX