Structural analysis of the murine IgG3 constant region gene

EMBO J. 1984 Sep;3(9):2041-6. doi: 10.1002/j.1460-2075.1984.tb02089.x.

Abstract

We have determined the complete sequence of the gamma 3 heavy chain constant (C gamma 3) region gene of the BALB/c mouse including the 5'-flanking region up to the switch site and the 3'-flanking region past the end of the membrane exons. The C gamma 3 coding region, typical of other IgGs, is divided into six exons corresponding to the protein domains (C gamma (3)1, hinge, C gamma (3)2, and C gamma (3)3) and to the membrane carboxyl terminus (M1 and M2). The predicted amino acid sequence of the gamma 3 chain has three potential N-linked carbohydrate addition sites (including one in the membrane spacer segment), as compared with a single occurrence in the other mouse IgGs. Between the switch recombination region and the body of the C gamma 3 gene, there is a remarkable homology with a sequence between C mu and C delta which provides a rationale for an alternative, T cell-independent class-switch mechanism. We have used a computer to analyze the secondary structure of the gamma 3 mRNA precursor for the membrane form. We predict that this RNA precursor (approximately 12 000 bp) folds into four leaf-like domains which correspond to the variable region, the large IVS, the body of the constant region, and the membrane exons. This organization may have a role to play in the function of the mRNA precursor.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cloning, Molecular
  • DNA Restriction Enzymes
  • Genes*
  • Immunoglobulin Constant Regions / genetics*
  • Immunoglobulin G / genetics*
  • Immunoglobulins / genetics*
  • Mice
  • Mice, Inbred BALB C
  • Nucleic Acid Conformation
  • RNA, Messenger / genetics

Substances

  • Immunoglobulin Constant Regions
  • Immunoglobulin G
  • Immunoglobulins
  • RNA, Messenger
  • DNA Restriction Enzymes

Associated data

  • GENBANK/J00451