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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2004 1
2007 1
2009 1
2010 2
2011 2
2012 3
2013 3
2014 4
2015 4
2016 4
2017 2
2018 4
2019 6
2020 6
2021 9
2022 5
2023 5
2024 1

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58 results

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Page 1
Ancestral Reconstruction.
Joy JB, Liang RH, McCloskey RM, Nguyen T, Poon AF. Joy JB, et al. PLoS Comput Biol. 2016 Jul 12;12(7):e1004763. doi: 10.1371/journal.pcbi.1004763. eCollection 2016 Jul. PLoS Comput Biol. 2016. PMID: 27404731 Free PMC article. No abstract available.
HIV reservoirs are dominated by genetically younger and clonally enriched proviruses.
Kinloch NN, Shahid A, Dong W, Kirkby D, Jones BR, Beelen CJ, MacMillan D, Lee GQ, Mota TM, Sudderuddin H, Barad E, Harris M, Brumme CJ, Jones RB, Brockman MA, Joy JB, Brumme ZL. Kinloch NN, et al. Among authors: joy jb. mBio. 2023 Nov 16;14(6):e0241723. doi: 10.1128/mbio.02417-23. Online ahead of print. mBio. 2023. PMID: 37971267 Free PMC article.
HIV reservoirs are dominated by genetically younger and clonally enriched proviruses.
Kinloch NN, Shahid A, Dong W, Kirkby D, Jones BR, Beelen CJ, MacMillan D, Lee GQ, Mota TM, Sudderuddin H, Barad E, Harris M, Brumme CJ, Jones RB, Brockman MA, Joy JB, Brumme ZL. Kinloch NN, et al. Among authors: joy jb. bioRxiv [Preprint]. 2023 Apr 13:2023.04.12.536611. doi: 10.1101/2023.04.12.536611. bioRxiv. 2023. PMID: 37090500 Free PMC article. Updated. Preprint.
Fundamental Identifiability Limits in Molecular Epidemiology.
Louca S, McLaughlin A, MacPherson A, Joy JB, Pennell MW. Louca S, et al. Among authors: joy jb. Mol Biol Evol. 2021 Aug 23;38(9):4010-4024. doi: 10.1093/molbev/msab149. Mol Biol Evol. 2021. PMID: 34009339 Free PMC article.
The emergence of SARS-CoV-2 in Europe and the US.
Worobey M, Pekar J, Larsen BB, Nelson MI, Hill V, Joy JB, Rambaut A, Suchard MA, Wertheim JO, Lemey P. Worobey M, et al. Among authors: joy jb. bioRxiv [Preprint]. 2020 May 23:2020.05.21.109322. doi: 10.1101/2020.05.21.109322. bioRxiv. 2020. PMID: 32511416 Free PMC article. Updated. Preprint.
The emergence of SARS-CoV-2 in Europe and North America.
Worobey M, Pekar J, Larsen BB, Nelson MI, Hill V, Joy JB, Rambaut A, Suchard MA, Wertheim JO, Lemey P. Worobey M, et al. Among authors: joy jb. Science. 2020 Oct 30;370(6516):564-570. doi: 10.1126/science.abc8169. Epub 2020 Sep 10. Science. 2020. PMID: 32912998 Free PMC article.
The replication-competent HIV reservoir is a genetically restricted, younger subset of the overall pool of HIV proviruses persisting during therapy, which is highly genetically stable over time.
Shahid A, MacLennan S, Jones BR, Sudderuddin H, Dang Z, Cobarrubias K, Duncan MC, Kinloch NN, Dapp MJ, Archin NM, Fischl MA, Ofotokun I, Adimora A, Gange S, Aouizerat B, Kuniholm MH, Kassaye S, Mullins JI, Goldstein H, Joy JB, Anastos K, Brumme ZL; MACS/WIHS combined cohort study (MWCSS). Shahid A, et al. Among authors: joy jb. J Virol. 2024 Feb 20;98(2):e0165523. doi: 10.1128/jvi.01655-23. Epub 2024 Jan 12. J Virol. 2024. PMID: 38214547 Free PMC article.
Genomic epidemiology of the first two waves of SARS-CoV-2 in Canada.
McLaughlin A, Montoya V, Miller RL, Mordecai GJ; Canadian COVID-19 Genomics Network (CanCOGen) Consortium; Worobey M, Poon AFY, Joy JB. McLaughlin A, et al. Among authors: joy jb. Elife. 2022 Aug 2;11:e73896. doi: 10.7554/eLife.73896. Elife. 2022. PMID: 35916373 Free PMC article.
58 results