N7-methylguanosine modification of lncRNAs in a rat model of hypoxic pulmonary hypertension: a comprehensive analysis

BMC Genomics. 2022 Jan 7;23(1):33. doi: 10.1186/s12864-021-08188-8.

Abstract

Background: Long non-coding RNAs (lncRNAs) play a critical role in the pathogenesis of hypoxic pulmonary hypertension (HPH). The role of N7-methylguanosine (m7G) modification in lncRNAs has received increased attentions in recent years. However, the m7G-methylation of lncRNA in HPH has yet to be determined. We have therefore performed a transcriptome-wide analysis of m7G lncRNAs in HPH.

Results: Differentially-expressed m7Gs were detected in HPH, and m7G lncRNAs were significantly upregulated compared with non-m7G lncRNAs in HPH. Importantly, this was the first time that the upregulated m7G lncXR_591973 and m7G lncXR_592398 were identified in HPH.

Conclusion: This study provides the first m7G transcriptome-wide analysis of HPH. Importantly, two HPH-associated m7G lncRNAs were identified, although their clinical significance requires further validation.

Keywords: Hypoxic pulmonary hypertension; N7-methylguanosine modification; lncRNAs; m7G-sequencing.

MeSH terms

  • Animals
  • Guanosine / analogs & derivatives
  • Hypertension, Pulmonary* / genetics
  • Hypoxia / genetics
  • RNA, Long Noncoding* / genetics
  • Rats

Substances

  • 8-methylguanosine
  • RNA, Long Noncoding
  • Guanosine