MicroRNA signature predicts survival in papillary thyroid carcinoma

J Cell Biochem. 2019 Oct;120(10):17050-17058. doi: 10.1002/jcb.28966. Epub 2019 May 17.

Abstract

Papillary thyroid cancer (PTC) accounts for the majority of malignant thyroid tumors. Recently, several microRNA (miRNA) expression profiling studies have used bioinformatics to suggest miRNA signatures as potential prognostic biomarkers in various malignancies. However, a prognostic miRNA biomarker has not yet been established for PTC. The aim of the present study was to identify miRNAs with prognostic value for the overall survival (OS) of patients with PTC by analyzing high-throughput miRNA data and their associated clinical characteristics downloaded from The Cancer Genome Atlas database. From our dataset, 150 differentially expressed miRNAs were identified between tumor and nontumor samples; of these miRNAs, 118 were upregulated and 32 were downregulated. Among the 150 differentially expressed miRNAs, a four miRNA signature was identified that reliably predicts OS in patients with PTC. This miRNA signature was able to classify patients into a high-risk group and a low-risk group with a significant difference in OS (P < .01). The prognostic value of the signature was validated in a testing set ( P < .01). The four miRNA signature was an independent prognostic predictor according to the multivariate analysis and demonstrated good performance in predicting 5-year disease survival with an area under the receiver operating characteristic curve area under the curve (AUC) score of 0.886. Thus, this signature may serve as a novel biomarker for predicting the survival of patients with PTC.

Keywords: The Cancer Genome Atlas; microRNA; overall survival; papillary thyroid carcinoma; prognostic markers.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Biomarkers, Tumor / genetics*
  • Biomarkers, Tumor / metabolism
  • Cluster Analysis
  • Female
  • Gene Expression Profiling
  • Gene Expression Regulation, Neoplastic*
  • Humans
  • Male
  • MicroRNAs / genetics*
  • MicroRNAs / metabolism
  • Middle Aged
  • Neoplasm Staging
  • Prognosis
  • ROC Curve
  • Survival Analysis
  • Thyroid Cancer, Papillary / diagnosis
  • Thyroid Cancer, Papillary / genetics*
  • Thyroid Cancer, Papillary / mortality
  • Thyroid Cancer, Papillary / pathology
  • Thyroid Neoplasms / diagnosis
  • Thyroid Neoplasms / genetics*
  • Thyroid Neoplasms / mortality
  • Thyroid Neoplasms / pathology
  • Transcriptome

Substances

  • Biomarkers, Tumor
  • MIRN196 microRNA, human
  • MIRN206 microRNA, human
  • MIRN6730 microRNA, human
  • MIRN6843 microRNA, human
  • MicroRNAs