DNA barcodes identify medically important tick species in Canada

Genome. 2017 Jan;60(1):74-84. doi: 10.1139/gen-2015-0179. Epub 2016 Jul 19.

Abstract

Medically important ticks (Acari: Ixodidae) are often difficult to identify morphologically. A standardized, molecular approach using a 658 base pair DNA barcode sequence (from the 5' region of the mitochondrial cytochrome c oxidase subunit I gene) was evaluated for its effectiveness in discriminating ticks in North America, with an emphasis on Canadian ticks. DNA barcodes were generated for 96 of 154 specimens representing 26 ixodid species. A genetic cluster analysis was performed on the barcode sequences, which separated specimens into haplogroups closely corresponding with morphologically identified species. The tree topology was further supported by a BIN analysis. COI sequences generated were found to have a mean maximum intraspecific divergence of 1.59% and a mean nearest neighbour divergence of 12.8%, indicating a significant "barcode gap". This study also revealed possible cryptic diversity among specimens morphologically identified as Ixodes soricis and Ixodes texanus. A PCR-based test for Borrelia burgdorferi determined that 18.1% of Lyme-competent ticks in this study were positive. This study is also the first to record a B. burgdorferi-positive exoskeleton. In conclusion, DNA barcoding is a powerful tool that clinicians can use to determine the identification of tick specimens which can help them to suggest whether an attached tick is a potential health risk.

Keywords: Borrelia burgdorferi; COI; DNA barcoding; codage à barres de l’ADN; cryptic diversity; diversité cryptique; identification des tiques; tick identification.

MeSH terms

  • Animals
  • Biodiversity
  • Borrelia burgdorferi / genetics
  • Canada
  • DNA Barcoding, Taxonomic*
  • Electron Transport Complex IV / genetics
  • Genes, Mitochondrial
  • Geography
  • Humans
  • Ixodes / classification
  • Ixodes / genetics
  • Ixodes / microbiology
  • Phylogeny
  • Sequence Analysis, DNA
  • Ticks / classification*
  • Ticks / genetics*
  • Ticks / microbiology

Substances

  • Electron Transport Complex IV