Sequence tags of provirus integration sites in DNAs of tumors induced by the murine retrovirus SL3-3

J Virol. 1996 Jun;70(6):4063-70. doi: 10.1128/JVI.70.6.4063-4070.1996.

Abstract

The murine retrovirus SL3-3 is a potent inducer of T-cell lymphomas when inoculated into susceptible newborn mice. The proviral integration site sequences were surveyed in tumor DNAs by a simple two-step PCR method. From 20 SL3-3-induced tumors a total of 39 provirus-host junctions were amplified and sequenced. Seven showed homology to known sequences. These included the known common integration site c-myc as well as genes not previously identified as targets of provirus integration, namely N-ras and the genes coding for major histocompatibility complex class 11 E-beta, protein kinase C-eta, and T-cell receptor beta-chain. Among these genes, the integrations in c-myc as well as the one in N-ras were found to be clonal. One of the remaining 32 proviral integration site sequences that show no similarities to known sequences may represent a common integration site, as 2 of the 20 tumors demonstrated clonal provirus insertion into this region.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • DNA, Neoplasm / genetics*
  • Genes, MHC Class II
  • Genes, myc
  • Genes, ras
  • Leukemia Virus, Murine / genetics*
  • Lymphoma, T-Cell / genetics
  • Lymphoma, T-Cell / virology*
  • Mice
  • Molecular Sequence Data
  • Polymerase Chain Reaction
  • Protein Kinase C / genetics
  • Protein Serine-Threonine Kinases*
  • Proto-Oncogene Proteins / genetics
  • Proto-Oncogene Proteins c-pim-1
  • Receptors, Antigen, T-Cell, alpha-beta / genetics
  • Repetitive Sequences, Nucleic Acid
  • Virus Integration*

Substances

  • DNA, Neoplasm
  • Proto-Oncogene Proteins
  • Receptors, Antigen, T-Cell, alpha-beta
  • Pim1 protein, mouse
  • Protein Serine-Threonine Kinases
  • Proto-Oncogene Proteins c-pim-1
  • Protein Kinase C

Associated data

  • GENBANK/Z69798
  • GENBANK/Z69799
  • GENBANK/Z69800
  • GENBANK/Z69801
  • GENBANK/Z69802
  • GENBANK/Z69803
  • GENBANK/Z69804
  • GENBANK/Z69805
  • GENBANK/Z69806
  • GENBANK/Z69807
  • GENBANK/Z69808
  • GENBANK/Z69809
  • GENBANK/Z69810
  • GENBANK/Z69811
  • GENBANK/Z69812
  • GENBANK/Z69813
  • GENBANK/Z69814
  • GENBANK/Z69815
  • GENBANK/Z69816
  • GENBANK/Z69817
  • GENBANK/Z69818
  • GENBANK/Z69819
  • GENBANK/Z69820
  • GENBANK/Z69821
  • GENBANK/Z69822
  • GENBANK/Z69823
  • GENBANK/Z69824
  • GENBANK/Z69825
  • GENBANK/Z69826
  • GENBANK/Z69827