cDNA and deduced amino acid sequences of ferret preproendothelin-2 and phylogenetic analysis

DNA Seq. 2002 Dec;13(6):369-74. doi: 10.1080/1042517021000060786.

Abstract

Ferret preproendothelin-2 (PPET2) cDNA was cloned from intestinal tissue by reverse transcription-polymerase chain reaction (RT-PCR) in conjunction with 5'- and 3'-rapid amplification of cDNA ends (RACE). The cDNA comprises 1230 bp, excluding the poly(A) tail, and has 534 bp of open reading frame encoding a putative polypeptide of 178 residues, in which a 21-amino acid mature endothelin-2 (ET2) peptide as well as a 24-amino acid putative signal peptide and a 16-amino acid ET2-like peptide were found. The homology of the full-length cDNA sequence of ferret with those of horse, human, mouse, or rat was 75.6, 71.6, 65.4 or 65.1%, respectively, and the homology of the coding region was 85.1, 81.6, 78.1 or 75.3%, respectively. Phylogenetic analysis among ferret, horse, human, mouse, rat and dog showed that ferret has a closer relationship to dog than to the other mammals.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Endothelins / genetics*
  • Ferrets / genetics*
  • Molecular Sequence Data
  • Phylogeny
  • Protein Precursors / genetics*

Substances

  • Endothelins
  • Protein Precursors
  • preproendothelin 2

Associated data

  • GENBANK/AB079607