Cited Articles for PMCID: 4693635

Year	Number of Results
1996	1
2001	6
2002	4
2003	1
2004	4
2005	5
2006	4
2007	2
2008	3
2009	5
2010	5
2024	0

1

A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness.

Burroughs AM, Ando Y, de Hoon MJ, Tomaru Y, Nishibu T, Ukekawa R, Funakoshi T, Kurokawa T, Suzuki H, Hayashizaki Y, Daub CO. Burroughs AM, et al. Genome Res. 2010 Oct;20(10):1398-410. doi: 10.1101/gr.106054.110. Epub 2010 Aug 18. Genome Res. 2010. PMID: 20719920 Free PMC article.

2

Mammalian microRNAs: experimental evaluation of novel and previously annotated genes.

Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP. Chiang HR, et al. Genes Dev. 2010 May 15;24(10):992-1009. doi: 10.1101/gad.1884710. Epub 2010 Apr 22. Genes Dev. 2010. PMID: 20413612 Free PMC article.

3

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.

Hafner M, Landthaler M, Burger L, Khorshid M, Hausser J, Berninger P, Rothballer A, Ascano M Jr, Jungkamp AC, Munschauer M, Ulrich A, Wardle GS, Dewell S, Zavolan M, Tuschl T. Hafner M, et al. Cell. 2010 Apr 2;141(1):129-41. doi: 10.1016/j.cell.2010.03.009. Cell. 2010. PMID: 20371350 Free PMC article.

4

I-TASSER: a unified platform for automated protein structure and function prediction.

Roy A, Kucukural A, Zhang Y. Roy A, et al. Nat Protoc. 2010 Apr;5(4):725-38. doi: 10.1038/nprot.2010.5. Epub 2010 Mar 25. Nat Protoc. 2010. PMID: 20360767 Free PMC article.

5

Molecular mechanisms that funnel RNA precursors into endogenous small-interfering RNA and microRNA biogenesis pathways in Drosophila.

Miyoshi K, Miyoshi T, Hartig JV, Siomi H, Siomi MC. Miyoshi K, et al. RNA. 2010 Mar;16(3):506-15. doi: 10.1261/rna.1952110. Epub 2010 Jan 19. RNA. 2010. PMID: 20086050 Free PMC article.

6

Alternative processing of primary microRNA transcripts by Drosha generates 5' end variation of mature microRNA.

Wu H, Ye C, Ramirez D, Manjunath N. Wu H, et al. PLoS One. 2009 Oct 27;4(10):e7566. doi: 10.1371/journal.pone.0007566. PLoS One. 2009. PMID: 19859542 Free PMC article.

7

TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation.

Heo I, Joo C, Kim YK, Ha M, Yoon MJ, Cho J, Yeom KH, Han J, Kim VN. Heo I, et al. Cell. 2009 Aug 21;138(4):696-708. doi: 10.1016/j.cell.2009.08.002. Cell. 2009. PMID: 19703396 Free article.

8

Fast and accurate short read alignment with Burrows-Wheeler transform.

Li H, Durbin R. Li H, et al. Bioinformatics. 2009 Jul 15;25(14):1754-60. doi: 10.1093/bioinformatics/btp324. Epub 2009 May 18. Bioinformatics. 2009. PMID: 19451168 Free PMC article.

9

MicroRNAs: target recognition and regulatory functions.

Bartel DP. Bartel DP. Cell. 2009 Jan 23;136(2):215-33. doi: 10.1016/j.cell.2009.01.002. Cell. 2009. PMID: 19167326 Free PMC article. Review.

10

Biogenesis of small RNAs in animals.

Kim VN, Han J, Siomi MC. Kim VN, et al. Nat Rev Mol Cell Biol. 2009 Feb;10(2):126-39. doi: 10.1038/nrm2632. Nat Rev Mol Cell Biol. 2009. PMID: 19165215 Review.

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