Cited Articles for PMCID: 8766483

Year	Number of Results
1951	1
1993	1
1996	1
1998	2
2001	1
2003	1
2004	2
2005	1
2006	2
2007	2
2008	3
2009	3
2010	6
2011	8
2012	6
2013	5
2014	7
2015	5
2016	6
2017	6
2018	14
2019	7
2020	6
2021	5
2024	0

1

INfrastructure for a PHAge REference Database: Identification of Large-Scale Biases in the Current Collection of Cultured Phage Genomes.

Cook R, Brown N, Redgwell T, Rihtman B, Barnes M, Clokie M, Stekel DJ, Hobman J, Jones MA, Millard A. Cook R, et al. Phage (New Rochelle). 2021 Dec 1;2(4):214-223. doi: 10.1089/phage.2021.0007. Epub 2021 Dec 16. Phage (New Rochelle). 2021. PMID: 36159887 Free PMC article.

2

Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection.

Maffei E, Shaidullina A, Burkolter M, Heyer Y, Estermann F, Druelle V, Sauer P, Willi L, Michaelis S, Hilbi H, Thaler DS, Harms A. Maffei E, et al. PLoS Biol. 2021 Nov 16;19(11):e3001424. doi: 10.1371/journal.pbio.3001424. eCollection 2021 Nov. PLoS Biol. 2021. PMID: 34784345 Free PMC article.

3

Rapid evolutionary turnover of mobile genetic elements drives bacterial resistance to phages.

Hussain FA, Dubert J, Elsherbini J, Murphy M, VanInsberghe D, Arevalo P, Kauffman K, Rodino-Janeiro BK, Gavin H, Gomez A, Lopatina A, Le Roux F, Polz MF. Hussain FA, et al. Science. 2021 Oct 22;374(6566):488-492. doi: 10.1126/science.abb1083. Epub 2021 Oct 21. Science. 2021. PMID: 34672730

4

Twelve years of SAMtools and BCFtools.

Danecek P, Bonfield JK, Liddle J, Marshall J, Ohan V, Pollard MO, Whitwham A, Keane T, McCarthy SA, Davies RM, Li H. Danecek P, et al. Gigascience. 2021 Feb 16;10(2):giab008. doi: 10.1093/gigascience/giab008. Gigascience. 2021. PMID: 33590861 Free PMC article.

5

Characterizing the portability of phage-encoded homologous recombination proteins.

Filsinger GT, Wannier TM, Pedersen FB, Lutz ID, Zhang J, Stork DA, Debnath A, Gozzi K, Kuchwara H, Volf V, Wang S, Rios X, Gregg CJ, Lajoie MJ, Shipman SL, Aach J, Laub MT, Church GM. Filsinger GT, et al. Nat Chem Biol. 2021 Apr;17(4):394-402. doi: 10.1038/s41589-020-00710-5. Epub 2021 Jan 18. Nat Chem Biol. 2021. PMID: 33462496 Free PMC article.

6

VIRIDIC-A Novel Tool to Calculate the Intergenomic Similarities of Prokaryote-Infecting Viruses.

Moraru C, Varsani A, Kropinski AM. Moraru C, et al. Viruses. 2020 Nov 6;12(11):1268. doi: 10.3390/v12111268. Viruses. 2020. PMID: 33172115 Free PMC article.

7

PhANNs, a fast and accurate tool and web server to classify phage structural proteins.

Cantu VA, Salamon P, Seguritan V, Redfield J, Salamon D, Edwards RA, Segall AM. Cantu VA, et al. PLoS Comput Biol. 2020 Nov 2;16(11):e1007845. doi: 10.1371/journal.pcbi.1007845. eCollection 2020 Nov. PLoS Comput Biol. 2020. PMID: 33137102 Free PMC article.

8

Flexible genes establish widespread bacteriophage pan-genomes in cryoconite hole ecosystems.

Bellas CM, Schroeder DC, Edwards A, Barker G, Anesio AM. Bellas CM, et al. Nat Commun. 2020 Sep 2;11(1):4403. doi: 10.1038/s41467-020-18236-8. Nat Commun. 2020. PMID: 32879312 Free PMC article.

9

Meta-iPVP: a sequence-based meta-predictor for improving the prediction of phage virion proteins using effective feature representation.

Charoenkwan P, Nantasenamat C, Hasan MM, Shoombuatong W. Charoenkwan P, et al. J Comput Aided Mol Des. 2020 Oct;34(10):1105-1116. doi: 10.1007/s10822-020-00323-z. Epub 2020 Jun 16. J Comput Aided Mol Des. 2020. PMID: 32557165

10

Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages.

Mathieu A, Dion M, Deng L, Tremblay D, Moncaut E, Shah SA, Stokholm J, Krogfelt KA, Schjørring S, Bisgaard H, Nielsen DS, Moineau S, Petit MA. Mathieu A, et al. Nat Commun. 2020 Jan 17;11(1):378. doi: 10.1038/s41467-019-14042-z. Nat Commun. 2020. PMID: 31953385 Free PMC article.

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