Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation

Protein Sci. 2020 Nov;29(11):2274-2280. doi: 10.1002/pro.3952. Epub 2020 Oct 24.

Abstract

Biofilms are accumulations of microorganisms embedded in extracellular matrices that protect against external factors and stressful environments. Cyanobacterial biofilms are ubiquitous and have potential for treatment of wastewater and sustainable production of biofuels. But the underlying mechanisms regulating cyanobacterial biofilm formation are unclear. Here, we report the solution NMR structure of a protein, Se0862, conserved across diverse cyanobacterial species and involved in regulation of biofilm formation in the cyanobacterium Synechococcus elongatus PCC 7942. Se0862 is a class α+β protein with ααββββαα topology and roll architecture, consisting of a four-stranded β-sheet that is flanked by four α-helices on one side. Conserved surface residues constitute a hydrophobic pocket and charged regions that are likely also present in Se0862 orthologs.

Keywords: NMR spectroscopy; S. elongatus PCC 7942; biofilm; cyanobacteria; protein structure.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bacterial Proteins / chemistry*
  • Biofilms*
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Conformation, alpha-Helical
  • Protein Conformation, beta-Strand
  • Synechococcus* / chemistry
  • Synechococcus* / physiology

Substances

  • Bacterial Proteins

Supplementary concepts

  • Synechococcus elongatus