DataSet Record GDS3341: Expression Profiles Data Analysis Tools Sample Subsets
Title: Nasopharyngeal carcinoma
Cluster AnalysisGDS3341 Cluster Image
Summary: Analysis of 31 laser-captured, microdissected nasopharyngeal carcinoma (NPC) tissues samples. NPC is an Epstein-Barr virus (EBV)-associated epithelial cancer prevalent in Southeast Asia. Results provide insight into the molecular mechanisms involved in EBV-associated epithelial cancers.
Organism: Homo sapiens
Platform: GPL570: [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
  • Dodd LE, Sengupta S, Chen IH, den Boon JA et al. Genes involved in DNA repair and nitrosamine metabolism and those located on chromosome 14q32 are dysregulated in nasopharyngeal carcinoma. Cancer Epidemiol Biomarkers Prev 2006 Nov;15(11):2216-25. PMID: 17119049
  • Sengupta S, den Boon JA, Chen IH, Newton MA et al. Genome-wide expression profiling reveals EBV-associated inhibition of MHC class I expression in nasopharyngeal carcinoma. Cancer Res 2006 Aug 15;66(16):7999-8006. PMID: 16912175
  • Hsu WL, Tse KP, Liang S, Chien YC et al. Evaluation of human leukocyte antigen-A (HLA-A), other non-HLA markers on chromosome 6p21 and risk of nasopharyngeal carcinoma. PLoS One 2012;7(8):e42767. PMID: 22880099
Reference Series: GSE12452 Sample count: 41
Value type: transformed count Series published: 2008/08/16