DataSet Record GDS825: Expression Profiles Data Analysis Tools Sample Subsets
Title: Breast cancer cell expression profiles (G4100A)
Cluster AnalysisGDS825 Cluster Image
Summary: Expression profiling of breast cancer cell lines HCC 1954 and MDA-MB-436 in reference to mammary epithelial cells. Results used to validate a method of comparing data generated from cDNA arrays to that from Affymetrix arrays. The method uses DNA sequence to match probes between platforms.
Organism: Homo sapiens
Platform: GPL875: Agilent Human 1 cDNA Microarray (G4100A) [layout A]
  • Mecham BH, Klus GT, Strovel J, Augustus M et al. Sequence-matched probes produce increased cross-platform consistency and more reproducible biological results in microarray-based gene expression measurements. Nucleic Acids Res 2004 May 25;32(9):e74. PMID: 15161944
Reference Series: GSE1299 Sample count: 4
Value type: log ratio Series published: 2004/04/13