Structure Links for Conserved Domains (Select 128804) - Structure - NCBI

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Links from Conserved Domains

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Select item 2334251.

Molecular Structure Image for 7EGB

TFIID-based holo PIC on SCP promoter[TRANSCRIPTION]

Taxonomy:: Homo sapiens, Sus scrofa

Proteins:: 49
Nucleic acids:: (DNA)
Chemicals:: 19
modified:: 2023-08-01

MMDB ID:: 233425
PDB ID:: 7EGB

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2297582.

Molecular Structure Image for 8BVW

RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W)[TRANSCRIPTION]

Taxonomy:: Homo sapiens, Sus scrofa, unidentified adenovirus, Xenopus laevis

Proteins:: 40
Nucleic acids:: (DNA)
Chemicals:: 19
modified:: 2023-05-30

MMDB ID:: 229758
PDB ID:: 8BVW

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2280793.

Molecular Structure Image for 8CEN

Yeast RNA polymerase II transcription pre-initiation complex with core Mediator[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae, synthetic construct

Proteins:: 44
Nucleic acids:: (DNA)
Chemicals:: 19
modified:: 2023-04-25

MMDB ID:: 228079
PDB ID:: 8CEN

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2275964.

Molecular Structure Image for 8CEO

Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleosome[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae, synthetic construct, Xenopus laevis

Proteins:: 52
Nucleic acids:: (DNA)
Chemicals:: 19
modified:: 2023-04-25

MMDB ID:: 227596
PDB ID:: 8CEO

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2232005.

Molecular Structure Image for 7ZSB

Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP, complex C[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae, synthetic construct, Xenopus laevis

Proteins:: 36
Nucleic acids:: (DNA)
Chemicals:: 19
modified:: 2023-03-01

MMDB ID:: 223200
PDB ID:: 7ZSB

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2231996.

Molecular Structure Image for 7ZSA

Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP (complex B)[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae, synthetic construct, Xenopus laevis

Proteins:: 36
Nucleic acids:: (DNA)
Chemicals:: 19
modified:: 2023-03-01

MMDB ID:: 223199
PDB ID:: 7ZSA

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2231987.

Molecular Structure Image for 7ZS9

Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome (complex A)[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae, synthetic construct, Xenopus laevis

Proteins:: 36
Nucleic acids:: (DNA)
Chemicals:: 19
modified:: 2023-03-01

MMDB ID:: 223198
PDB ID:: 7ZS9

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2226218.

Molecular Structure Image for 8GXS

PIC-Mediator in complex with +1 nucleosome (T40N) in H-binding state[TRANSCRIPTION]

Taxonomy:: synthetic construct, Homo sapiens, Xenopus laevis, Sus scrofa

Proteins:: 83
Nucleic acids:: (DNA)
Chemicals:: 21
modified:: 2022-11-02

MMDB ID:: 222621
PDB ID:: 8GXS

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2226209.

Molecular Structure Image for 8GXQ

PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state[TRANSCRIPTION]

Taxonomy:: synthetic construct, Homo sapiens, Xenopus laevis, Sus scrofa

Proteins:: 83
Nucleic acids:: (DNA)
Chemicals:: 21
modified:: 2022-11-02

MMDB ID:: 222620
PDB ID:: 8GXQ

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20327210.

Molecular Structure Image for 7O75

Yeast RNA polymerase II transcription pre-initiation complex with open promoter DNA[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae S288C, Saccharomyces cerevisiae YJM984

Proteins:: 28
Nucleic acids:: (DNA)
Chemicals:: 22
modified:: 2021-08-09

MMDB ID:: 203272
PDB ID:: 7O75

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20327111.

Molecular Structure Image for 7O73

Yeast RNA polymerase II transcription pre-initiation complex with closed distorted promoter DNA[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae S288C, synthetic construct

Proteins:: 28
Nucleic acids:: (DNA)
Chemicals:: 22
modified:: 2021-08-09

MMDB ID:: 203271
PDB ID:: 7O73

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20327012.

Molecular Structure Image for 7O72

Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae S288C, synthetic construct

Proteins:: 28
Nucleic acids:: (DNA)
Chemicals:: 22
modified:: 2021-08-09

MMDB ID:: 203270
PDB ID:: 7O72

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20326813.

Molecular Structure Image for 7O4L

Yeast TFIIH in the expanded state within the pre-initiation complex[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae S288C, synthetic construct

Proteins:: 15
Nucleic acids:: (DNA)
Chemicals:: 15
modified:: 2021-08-09

MMDB ID:: 203268
PDB ID:: 7O4L

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20326714.

Molecular Structure Image for 7O4K

Yeast TFIIH in the contracted state within the pre-initiation complex[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae S288C, synthetic construct

Proteins:: 15
Nucleic acids:: (DNA)
Chemicals:: 14
modified:: 2021-08-09

MMDB ID:: 203267
PDB ID:: 7O4K

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20326615.

Molecular Structure Image for 7O4J

Yeast RNA polymerase II transcription pre-initiation complex (consensus)[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae S288C, synthetic construct

Proteins:: 28
Nucleic acids:: (DNA)
Chemicals:: 22
modified:: 2021-08-09

MMDB ID:: 203266
PDB ID:: 7O4J

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20326516.

Molecular Structure Image for 7O4I

Yeast RNA polymerase II transcription pre-initiation complex with initial transcription bubble[TRANSCRIPTION]

Taxonomy:: Saccharomyces cerevisiae S288C, synthetic construct

Proteins:: 28
Nucleic acids:: (DNA)
Chemicals:: 22
modified:: 2021-08-09

MMDB ID:: 203265
PDB ID:: 7O4I

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20245317.

Molecular Structure Image for 7ENC

TFIID-based PIC-Mediator holo-complex in fully-assembled state (hPIC-MED)[TRANSCRIPTION]

Taxonomy:: Homo sapiens, Sus scrofa

Proteins:: 74
Nucleic acids:: (DNA)
Chemicals:: 18
modified:: 2021-06-19

MMDB ID:: 202453
PDB ID:: 7ENC

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20245218.

Molecular Structure Image for 7ENA

TFIID-based PIC-Mediator holo-complex in pre-assembled state (pre-hPIC-MED)[TRANSCRIPTION]

Taxonomy:: Homo sapiens, Sus scrofa

Proteins:: 74
Nucleic acids:: (DNA)
Chemicals:: 18
modified:: 2021-06-19

MMDB ID:: 202452
PDB ID:: 7ENA

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20189919.

Molecular Structure Image for 7EGC

p53-bound TFIID-based holo PIC on HDM2 promoter[TRANSCRIPTION]

Taxonomy:: Homo sapiens, Sus scrofa

Proteins:: 49
Nucleic acids:: (DNA)
Chemicals:: 18
modified:: 2021-05-15

MMDB ID:: 201899
PDB ID:: 7EGC

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 20173120.

Molecular Structure Image for 7NW0

RNA polymerase II pre-initiation complex with open promoter DNA[TRANSCRIPTION]

Taxonomy:: Homo sapiens, Sus scrofa, Human mastadenovirus C

Proteins:: 30
Nucleic acids:: (DNA)
Chemicals:: 20
modified:: 2021-06-19

MMDB ID:: 201731
PDB ID:: 7NW0

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

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Protein Domain Families

Families (50)
Structures with functionally specific protein families
Superfamilies (51)
Structures with evolutionary related protein superfamilies

Complexes

Protein-Protein (50)
Structures containing multiple proteins
Protein-DNA (49)
Structures containing proteins and DNA
Protein-RNA (2)
Structures containing proteins and RNA
Protein-Chemical (51)
Structures containing proteins and chemicals

Literature

PubMed (51)
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