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    LOC100205002 uncharacterized LOC100205002 [ Hydra vulgaris (swiftwater hydra) ]

    Gene ID: 100205002, updated on 31-Mar-2022

    Summary

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    Gene symbol
    LOC100205002
    Gene description
    uncharacterized LOC100205002
    See related
    EnsemblRapid:LOC100205002
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Hydra vulgaris
    Lineage
    Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
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    Genomic context

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    See LOC100205002 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Hydra_105_v3 (GCF_022113875.1) 7 NC_061162.1 (2210765..2216218)
    102 previous assembly Hydra_RP_1.0 (GCF_000004095.1) Unplaced Scaffold NW_004168169.1 (73327..83708, complement)

    Chromosome 7 - NC_061162.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124813857 Neighboring gene splicing factor 3B subunit 1 Neighboring gene uncharacterized LOC124813841 Neighboring gene GATA zinc finger domain-containing protein 14

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel gene family controls species-specific morphological traits in Hydra. Khalturin K, et al. PLoS Biol, 2008 Nov 18. PMID 19018660, Free PMC Article
    2. Evolution of complex structures: minicollagens shape the cnidarian nematocyst. David CN, et al. Trends Genet, 2008 Sep. PMID 18676050
    3. Mini-collagens in hydra nematocytes. Kurz EM, et al. J Cell Biol, 1991 Nov. PMID 1955459, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized LOC100205002
    Names
    minicollagen 16
    minicollagen 17
    minicollagen-15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001280937.1 → NP_001267866.1  uncharacterized LOC100205002 precursor

      See identical proteins and their annotated locations for NP_001267866.1

      Status: PROVISIONAL

      Source sequence(s)
      BK008449
      UniProtKB/TrEMBL
      G7H7W8
      Related
      NP_001267866.1, NM_001280937.1

    RefSeqs of Annotated Genomes: Hydra vulgaris Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Hydra_105_v3 Primary Assembly

    Genomic

    1. NC_061162.1 Reference Hydra_105_v3 Primary Assembly

      Range
      2210765..2216218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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