RSP13 ribosomal protein S13 [Glycine max (soybean)] - Gene

Summary

Gene symbol: RSP13
Gene description: ribosomal protein S13
Locus tag: GLYMA_02G078000v4
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Glycine max
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

Location:: chromosome: 2

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
104	current	Glycine_max_v4.0 (GCF_000004515.6)	2	NC_016089.4 (6706893..6708494)
103	previous assembly	Glycine_max_v2.1 (GCF_000004515.5)	2	NC_016089.3 (6736124..6737811)

Chromosome 2 - NC_016089.4 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in translation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed
located_in ribosome	IEA Inferred from Electronic Annotation more info	PubMed
part_of small ribosomal subunit	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: small ribosomal subunit protein uS13m; small ribosomal subunit protein S13, mitochondrial

Names: Small ribosomal subunit protein S13, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001400384.1 → NP_001387313.1 small ribosomal subunit protein uS13m

Status: VALIDATED

Source sequence(s)

BG237013, CO985620

UniProtKB/Swiss-Prot

Q8LPW2

UniProtKB/TrEMBL

A0A0R0L2R5

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

NC_016089.4 Reference Glycine_max_v4.0 Primary Assembly

Range

6706893..6708494

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_006574305.3 → XP_006574368.1 small ribosomal subunit protein S13, mitochondrial isoform X1

UniProtKB/Swiss-Prot

Q8LPW2

UniProtKB/TrEMBL

A0A0R0L2R5

Conserved Domains (1) summary

cl00331
Location:38 → 143

Ribosomal_S13; Ribosomal protein S13/S18

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001249512.1: Suppressed sequence

Description

NM_001249512.1: This RefSeq was removed because currently there is insufficient support for the transcript.