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    LOC100890500 serine/threonine-protein phosphatase 1 regulatory subunit 10 [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 100890500, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC100890500
    Gene description
    serine/threonine-protein phosphatase 1 regulatory subunit 10
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
    Also known as
    Trf; 185/333; Sp185/333
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    Genomic context

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    See LOC100890500 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145613.1 (7090388..7093132, complement)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577086.1 (477032..478958)

    NW_022145613.1Genomic Context describing neighboring genes Neighboring gene 185/333 Neighboring gene translation initiation factor IF-2-like Neighboring gene hyalin Neighboring gene U11/U12 small nuclear ribonucleoprotein 25 kDa protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Single sea urchin phagocytes express messages of a single sequence from the diverse Sp185/333 gene family in response to bacterial challenge. Majeske AJ, et al. J Immunol, 2014 Dec 1. PMID 25355922
    2. Distinctive expression patterns of 185/333 genes in the purple sea urchin, Strongylocentrotus purpuratus: an unexpectedly diverse family of transcripts in response to LPS, beta-1,3-glucan, and dsRNA. Terwilliger DP, et al. BMC Mol Biol, 2007 Mar 1. PMID 17331248, Free PMC Article
    3. Unexpected diversity displayed in cDNAs expressed by the immune cells of the purple sea urchin, Strongylocentrotus purpuratus. Terwilliger DP, et al. Physiol Genomics, 2006 Jul 12. PMID 16837652

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    serine/threonine-protein phosphatase 1 regulatory subunit 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145613.1 Reference Spur_5.0 Primary Assembly

      Range
      7090388..7093132 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011666362.2 → XP_011664664.2  serine/threonine-protein phosphatase 1 regulatory subunit 10

      UniProtKB/TrEMBL
      A1DXE2, E3CTL9, Q3LS96
      Conserved Domains (2) summary
      pfam02084
      Location:68 → 158
      Bindin
      pfam12782
      Location:1 → 470
      Innate_immun; Invertebrate innate immunity transcript family
    Nucleotide Protein
    Heading Accession and Version

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