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    CALB1 calbindin 1 [ Anas platyrhynchos (mallard) ]

    Gene ID: 101802006, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CALB1
    Gene description
    calbindin 1
    Locus tag
    Anapl_14984
    See related
    EnsemblRapid:ENSAPLG00030020135
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anas platyrhynchos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
    Also known as
    Calbindin
    Orthologs
    human mouse all
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    Genomic context

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    See CALB1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current ZJU1.0 (GCF_015476345.1) 2 NC_051773.1 (27928291..27946747)
    103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 2 NC_040047.1 (130612303..130630818, complement)

    Chromosome 2 - NC_051773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113842886 Neighboring gene uncharacterized LOC113842595 Neighboring gene 2,4-dienoyl-CoA reductase 1 Neighboring gene nibrin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of long-term synaptic potentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of presynaptic cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic spine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in terminal bouton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: calbindin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ZJU1.0 Primary Assembly

    Genomic

    1. NC_051773.1 Reference ZJU1.0 Primary Assembly

      Range
      27928291..27946747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027452451.2 → XP_027308252.1  LOW QUALITY PROTEIN: calbindin

      UniProtKB/TrEMBL
      A0A8B9ZAL9, R0KYP7, U3IE20
      Related
      ENSAPLP00030033503.1, ENSAPLT00030052578.1
      Conserved Domains (1) summary
      cd16176
      Location:17 → 260
      EFh_HEF_CB; EF-hand, calcium binding motif, found in calbindin (CB)
    Nucleotide Protein
    Heading Accession and Version

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