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    Gp2 glycoprotein 2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

    Gene ID: 101968903, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Gp2
    Gene description
    glycoprotein 2
    Locus tag
    H1C71_029029
    See related
    EnsemblRapid:ENSSTOG00015017482
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ictidomys tridecemlineatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
    Orthologs
    human mouse all
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    Genomic context

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    See Gp2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024409344.1 (117718768..117730626, complement)
    102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936501.1 (5816629..5828470, complement)

    NW_024409344.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120887659 Neighboring gene uncharacterized LOC120887610 Neighboring gene uncharacterized LOC120887489 Neighboring gene uromodulin Neighboring gene protein disulfide isomerase like, testis expressed

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in neutrophil migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pancreatic secretory granule membrane major glycoprotein GP2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HiC_Itri_2 Primary Assembly

    Genomic

    1. NW_024409344.1 Reference HiC_Itri_2 Primary Assembly

      Range
      117718768..117730626 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005323716.3 → XP_005323773.1  pancreatic secretory granule membrane major glycoprotein GP2

      UniProtKB/TrEMBL
      I3LZ56
      Related
      ENSSTOP00015021571.1, ENSSTOT00015023558.1
      Conserved Domains (1) summary
      smart00241
      Location:219 → 470
      ZP; Zona pellucida (ZP) domain
    Nucleotide Protein
    Heading Accession and Version

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