U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC104949490 tubulin beta-2A chain [ Notothenia coriiceps (black rockcod) ]

    Gene ID: 104949490, updated on 22-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC104949490
    Gene description
    tubulin beta-2A chain
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Notothenia coriiceps
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC104949490 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011348994.1 (115634..119972)

    NW_011348994.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104949488 Neighboring gene solute carrier family 22 member 23 Neighboring gene desmoglein-2-like Neighboring gene desmocollin 2 like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_011348994.1 Unplaced Scaffold Reference NC01 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cold adaptation of microtubule assembly and dynamics. Structural interpretation of primary sequence changes present in the alpha- and beta-tubulins of Antarctic fishes. Detrich HW 3rd, et al. J Biol Chem, 2000 Nov 24. PMID 10956651

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tubulin beta-2A chain
    Names
    beta tubulin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001303301.1 → NP_001290230.1  tubulin beta-2A chain

      See identical proteins and their annotated locations for NP_001290230.1

      Status: PROVISIONAL

      Source sequence(s)
      AF255555
      UniProtKB/TrEMBL
      Q9DFT5
      Conserved Domains (1) summary
      PLN00220
      Location:1 → 437
      PLN00220; tubulin beta chain; Provisional

    RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NC01 Primary Assembly

    Genomic

    1. NW_011348994.1 Reference NC01 Primary Assembly

      Range
      115634..119972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010775851.1 → XP_010774153.1  tubulin beta-2A chain isoform X1

      Conserved Domains (1) summary
      PLN00220
      Location:1 → 437
      PLN00220; tubulin beta chain; Provisional

    2. XM_010775852.1 → XP_010774154.1  tubulin beta-2A chain isoform X2

      UniProtKB/TrEMBL
      A0A6I9N833
      Conserved Domains (1) summary
      PLN00220
      Location:1 → 434
      PLN00220; tubulin beta chain; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases