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    LOC106687921 uncharacterized LOC106687921 [ Halyomorpha halys (brown marmorated stink bug) ]

    Gene ID: 106687921, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC106687921
    Gene description
    uncharacterized LOC106687921
    See related
    EnsemblRapid:LOC106687921
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Halyomorpha halys
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera; Panheteroptera; Pentatomomorpha; Pentatomoidea; Pentatomidae; Pentatominae; Halyomorpha
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    Genomic context

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    See LOC106687921 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    101 current Hhal_2.0 (GCF_000696795.2) Unplaced Scaffold NW_020110991.1 (16898..85766, complement)
    100 previous assembly Hhal_1.0 (GCF_000696795.1) Unplaced Scaffold NW_014467442.1 (16898..89105, complement)

    NW_020110991.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112210756 Neighboring gene oligoribonuclease, mitochondrial Neighboring gene uncharacterized LOC106687918

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys. Ioannidis P, et al. BMC Genomics, 2014 Aug 29. PMID 25168586, Free PMC Article
    2. Transcriptome of the invasive brown marmorated stink bug, Halyomorpha halys (Stål) (Heteroptera: Pentatomidae). Sparks ME, et al. PLoS One, 2014. PMID 25386688, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC106687921

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Halyomorpha halys Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Hhal_2.0 Primary Assembly

    Genomic

    1. NW_020110991.1 Reference Hhal_2.0 Primary Assembly

      Range
      16898..85766 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014432091.2 → XP_014287577.1  uncharacterized protein LOC106687921 isoform X2

      Related
      XP_014287577.1, XM_014432091.2
      Conserved Domains (4) summary
      smart00717
      Location:467 → 513
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam00249
      Location:775 → 815
      Myb_DNA-binding; Myb-like DNA-binding domain
      pfam15784
      Location:192 → 274
      GPS2_interact; G-protein pathway suppressor 2-interacting domain
      cl21498
      Location:469 → 512
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

    2. XM_014432090.2 → XP_014287576.1  uncharacterized protein LOC106687921 isoform X1

      Related
      XP_014287576.1, XM_014432090.2
      Conserved Domains (4) summary
      smart00717
      Location:467 → 513
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam00249
      Location:775 → 815
      Myb_DNA-binding; Myb-like DNA-binding domain
      pfam15784
      Location:192 → 274
      GPS2_interact; G-protein pathway suppressor 2-interacting domain
      cl21498
      Location:469 → 512
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    Nucleotide Protein
    Heading Accession and Version

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