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    TBX21 T-box transcription factor 21 [ Lonchura striata domestica (Bengalese finch) ]

    Gene ID: 110478683, updated on 15-Mar-2024

    Summary

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    Gene symbol
    TBX21
    Gene description
    T-box transcription factor 21
    Locus tag
    RLOC_00003077
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lonchura striata domestica (sub-species: domestica)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
    Also known as
    EOMES
    Orthologs
    human mouse all
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    Genomic context

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    See TBX21 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current lonStrDom2 (GCF_005870125.1) 27 NC_042592.1 (320475..330103)
    100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657148.1 (312035..321663)

    Chromosome 27 - NC_042592.1Genomic Context describing neighboring genes Neighboring gene aminopeptidase puromycin sensitive Neighboring gene karyopherin subunit beta 1 Neighboring gene TBK1 binding protein 1 Neighboring gene uncharacterized LOC116184517 Neighboring gene uncharacterized LOC116184518 Neighboring gene oxysterol binding protein like 7 Neighboring gene mitochondrial ribosomal protein L10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lymphocyte migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-box transcription factor TBX21
    Names
    Eomesodermin
    T-box 21

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference lonStrDom2 Primary Assembly

    Genomic

    1. NC_042592.1 Reference lonStrDom2 Primary Assembly

      Range
      320475..330103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021545478.1 → XP_021401153.1  T-box transcription factor TBX21

      Conserved Domains (2) summary
      pfam00907
      Location:116 → 303
      T-box
      pfam16176
      Location:329 → 405
      T-box_assoc; T-box transcription factor-associated
    Nucleotide Protein
    Heading Accession and Version

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