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    ccl25a chemokine (C-C motif) ligand 25a [ Acanthochromis polyacanthus (spiny chromis) ]

    Gene ID: 110957595, updated on 15-Mar-2024

    Summary

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    Gene symbol
    ccl25a
    Gene description
    chemokine (C-C motif) ligand 25a
    See related
    Ensembl:ENSAPOG00000003504
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acanthochromis polyacanthus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
    Orthologs
    zebrafish all
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    Genomic context

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    See ccl25a in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 9 NC_067121.1 (15942866..15945161, complement)

    Chromosome 9 - NC_067121.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase NIM1 Neighboring gene pinhead Neighboring gene uncharacterized LOC127535514 Neighboring gene RAN binding protein 3b Neighboring gene neurturin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067121.1 Chromosome 9 Reference KAUST_Apoly_ChrSc

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CCR chemokine receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chemokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to interleukin-1 IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to tumor necrosis factor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to type II interferon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lymphocyte chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monocyte chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neutrophil chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of ERK1 and ERK2 cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-C motif chemokine 20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KAUST_Apoly_ChrSc

    Genomic

    1. NC_067121.1 Reference KAUST_Apoly_ChrSc

      Range
      15942866..15945161 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022203697.2 → XP_022059389.1  C-C motif chemokine 20

      UniProtKB/TrEMBL
      A0A3Q1EER7
      Related
      ENSAPOP00000002138.1
      Conserved Domains (1) summary
      pfam00048
      Location:26 → 85
      IL8; Small cytokines (intecrine/chemokine), interleukin-8 like
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases