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    LOC121168137 titin [ Ochotona curzoniae (black-lipped pika) ]

    Gene ID: 121168137, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC121168137
    Gene description
    titin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ochotona curzoniae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
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    Genomic context

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    See LOC121168137 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    315
    Annotation release Status Assembly Chr Location
    100 current NIBS_Ocur_1.0 (GCF_017591425.1) Unplaced Scaffold NW_024467040.1 (212763..475645)

    NW_024467040.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 141-like Neighboring gene U6 spliceosomal RNA Neighboring gene pleckstrin homology domain-containing family A member 3 Neighboring gene 40S ribosomal protein S6-like Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024467040 Unplaced Scaffold Reference NIBS_Ocur_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    titin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ochotona curzoniae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NIBS_Ocur_1.0 Primary Assembly

    Genomic

    1. NW_024467040.1 Reference NIBS_Ocur_1.0 Primary Assembly

      Range
      212763..475645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040997939.1 → XP_040853873.1  titin isoform X1

      Conserved Domains (11) summary
      cd05747
      Location:33469 → 33560
      IgI_Titin_like; Immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins; member of the I-set of Ig superfamily (IgSF) domains
      smart00408
      Location:28488 → 28546
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:34053 → 34136
      IG; Immunoglobulin
      smart00410
      Location:7300 → 7381
      IG_like; Immunoglobulin like
      COG0810
      Location:11884 → 11999
      TonB; Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis]
      PRK10819
      Location:11624 → 11714
      PRK10819; transport protein TonB; Provisional
      cd00063
      Location:25813 → 25905
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14104
      Location:32161 → 32437
      STKc_Titin; Catalytic domain of the Giant Serine/Threonine Kinase Titin
      TIGR04526
      Location:10918 → 11005
      predic_Ig_block; putative immunoglobulin-blocking virulence protein
      cd00096
      Location:7308 → 7315
      Ig; Ig strand B [structural motif]
      cl11960
      Location:7571 → 7652
      Ig; Immunoglobulin domain

    2. XM_040997940.1 → XP_040853874.1  titin isoform X2

      Conserved Domains (11) summary
      cd05747
      Location:32537 → 32628
      IgI_Titin_like; Immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins; member of the I-set of Ig superfamily (IgSF) domains
      smart00408
      Location:27556 → 27614
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:33121 → 33204
      IG; Immunoglobulin
      smart00410
      Location:6368 → 6449
      IG_like; Immunoglobulin like
      COG0810
      Location:10952 → 11067
      TonB; Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis]
      PRK10819
      Location:10692 → 10782
      PRK10819; transport protein TonB; Provisional
      cd00063
      Location:24881 → 24973
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14104
      Location:31229 → 31505
      STKc_Titin; Catalytic domain of the Giant Serine/Threonine Kinase Titin
      TIGR04526
      Location:9986 → 10073
      predic_Ig_block; putative immunoglobulin-blocking virulence protein
      cd00096
      Location:6377 → 6381
      Ig; Ig strand B [structural motif]
      cl11960
      Location:6639 → 6720
      Ig; Immunoglobulin domain

    3. XM_040997941.1 → XP_040853875.1  titin isoform X3

      Conserved Domains (9) summary
      cd05747
      Location:26188 → 26279
      IgI_Titin_like; Immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins; member of the I-set of Ig superfamily (IgSF) domains
      smart00408
      Location:21207 → 21265
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:26772 → 26855
      IG; Immunoglobulin
      smart00410
      Location:907 → 989
      IG_like; Immunoglobulin like
      COG0810
      Location:4603 → 4718
      TonB; Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis]
      cd00063
      Location:18532 → 18624
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14104
      Location:24880 → 25156
      STKc_Titin; Catalytic domain of the Giant Serine/Threonine Kinase Titin
      cd00096
      Location:899 → 906
      Ig; Ig strand A [structural motif]
      cl11960
      Location:22685 → 22767
      Ig; Immunoglobulin domain

    4. XM_040997942.1 → XP_040853876.1  titin isoform X4

      Conserved Domains (9) summary
      cd05747
      Location:26063 → 26154
      IgI_Titin_like; Immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins; member of the I-set of Ig superfamily (IgSF) domains
      smart00408
      Location:21082 → 21140
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:111 → 193
      IG; Immunoglobulin
      smart00410
      Location:26647 → 26730
      IG_like; Immunoglobulin like
      COG0810
      Location:4478 → 4593
      TonB; Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis]
      cd00063
      Location:18407 → 18499
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14104
      Location:24755 → 25031
      STKc_Titin; Catalytic domain of the Giant Serine/Threonine Kinase Titin
      cd00096
      Location:26641 → 26647
      Ig; Ig strand A [structural motif]
      cl11960
      Location:22560 → 22642
      Ig; Immunoglobulin domain

    5. XM_040997943.1 → XP_040853877.1  titin isoform X5

      Conserved Domains (9) summary
      cd05747
      Location:26027 → 26118
      IgI_Titin_like; Immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins; member of the I-set of Ig superfamily (IgSF) domains
      smart00408
      Location:21046 → 21104
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:111 → 193
      IG; Immunoglobulin
      smart00410
      Location:26611 → 26694
      IG_like; Immunoglobulin like
      COG0810
      Location:4442 → 4557
      TonB; Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis]
      cd00063
      Location:18371 → 18463
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14104
      Location:24719 → 24995
      STKc_Titin; Catalytic domain of the Giant Serine/Threonine Kinase Titin
      cd00096
      Location:26605 → 26611
      Ig; Ig strand A [structural motif]
      cl11960
      Location:22524 → 22606
      Ig; Immunoglobulin domain

    6. XM_040997944.1 → XP_040853878.1  titin isoform X6

      Conserved Domains (6) summary
      PTZ00121
      Location:414 → 726
      PTZ00121; MAEBL; Provisional
      smart00409
      Location:13 → 97
      IG; Immunoglobulin
      smart00410
      Location:952 → 1034
      IG_like; Immunoglobulin like
      PRK12323
      Location:255 → 360
      PRK12323; DNA polymerase III subunit gamma/tau
      cd00096
      Location:944 → 951
      Ig; Ig strand A [structural motif]
      cl11960
      Location:1718 → 1790
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version