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    trmt11 tRNA methyltransferase 11 homolog [ Solea senegalensis (Senegalese sole) ]

    Gene ID: 122775299, updated on 22-Mar-2024

    Summary

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    Gene symbol
    trmt11
    Gene description
    tRNA methyltransferase 11 homolog
    Locus tag
    JOB18_041407
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solea senegalensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
    Orthologs
    human zebrafish all
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    Genomic context

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    See trmt11 in Genome Data Viewer
    Location:
    chromosome: LG9
    Exon count:
    16
    Annotation release Status Assembly LG Location
    100 current IFAPA_SoseM_1 (GCF_019176455.1) LG9 NC_058029.1 (13447539..13490748, complement)

    Linkage Group LG9 - NC_058029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122774406 Neighboring gene malate dehydrogenase 2, NAD (mitochondrial) Neighboring gene R-spondin 3 Neighboring gene actin-binding Rho-activating protein-like Neighboring gene histidine triad nucleotide binding protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058029.1 Chromosome LG9 Reference IFAPA_SoseM_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (guanine(10)-N2)-methyltransferase homolog
    Names
    tRNA (guanine(10)-N2)-methyltransferase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IFAPA_SoseM_1 Primary Assembly

    Genomic

    1. NC_058029.1 Reference IFAPA_SoseM_1 Primary Assembly

      Range
      13447539..13490748 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044035149.1 → XP_043891084.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1

      Conserved Domains (1) summary
      COG1041
      Location:10 → 416
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

    2. XM_044035150.1 → XP_043891085.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X2

      Conserved Domains (1) summary
      COG1041
      Location:10 → 416
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

    3. XM_044035153.1 → XP_043891088.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X5

      Conserved Domains (1) summary
      COG1041
      Location:10 → 400
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

    4. XM_044035151.1 → XP_043891086.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X3

      Conserved Domains (1) summary
      COG1041
      Location:10 → 400
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

    5. XM_044035154.1 → XP_043891089.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X6

      Conserved Domains (1) summary
      COG1041
      Location:10 → 400
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

    6. XM_044035152.1 → XP_043891087.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X4

      Conserved Domains (1) summary
      COG1041
      Location:10 → 400
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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