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    LOC124202450 chitinase-3-like protein 2 [ Daphnia pulex (common water flea) ]

    Gene ID: 124202450, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC124202450
    Gene description
    chitinase-3-like protein 2
    See related
    EnsemblRapid:LOC124202450
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Daphnia pulex
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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    Genomic context

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    See LOC124202450 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current ASM2113471v1 (GCF_021134715.1) 9 NC_060025.1 (3139710..3141496)

    Chromosome 9 - NC_060025.1Genomic Context describing neighboring genes Neighboring gene cuticle protein 19-like Neighboring gene probable chitinase 10 Neighboring gene uncharacterized LOC124202411 Neighboring gene uncharacterized LOC124202413 Neighboring gene 5-hydroxytryptamine receptor 1B-like Neighboring gene 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT6-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_060025.1 Chromosome 9 Reference ASM2113471v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Immune genes undergo more adaptive evolution than non-immune system genes in Daphnia pulex. McTaggart SJ, et al. BMC Evol Biol, 2012 May 11. PMID 22577801, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chitin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chitinase-3-like protein 2
    Names
    chitinase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Daphnia pulex Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2113471v1 Primary Assembly

    Genomic

    1. NC_060025.1 Reference ASM2113471v1 Primary Assembly

      Range
      3139710..3141496
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046598789.1 → XP_046454745.1  chitinase-3-like protein 2

      Related
      XP_046454745.1, XM_046598789.1
    Nucleotide Protein
    Heading Accession and Version