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    ORF1 replicase [ Porcine circovirus 2 ]

    Gene ID: 2943186, updated on 18-Aug-2023

    Summary

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    Gene symbol
    ORF1
    Gene description
    replicase
    Locus tag
    PCV2_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Porcine circovirus 2 (isolate: AUT1)
    Lineage
    Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus
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    Genomic context

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    Sequence:
    NC_005148.1 (51..995)

    NC_005148.1Genomic Context describing neighboring genes Neighboring gene ORF3 protein Neighboring gene capsid protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_005148.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mechanism of DNA Interaction and Translocation by the Replicase of a Circular Rep-Encoding Single-Stranded DNA Virus. Tarasova E, et al. mBio, 2021 Aug 31. PMID 34311576, Free PMC Article
    2. [Biological character of porcine circovirus type 2 with site mutation at interferon stimulation reaction element (ISRE) like region in Rep gene promoter]. Gu J, et al. Wei Sheng Wu Xue Bao, 2009 Sep. PMID 20030061

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Mutation in Rep promoter decreased the interferon induced viral replication.
      Title: [Biological character of porcine circovirus type 2 with site mutation at interferon stimulation reaction element (ISRE) like region in Rep gene promoter].
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    replicase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_005148.1 Reference assembly

      Range
      51..995
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_937956.1 replicase [Porcine circovirus 2]

      See identical proteins and their annotated locations for NP_937956.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A385HCW4, A0A6B9VWE5, A4ZIC0, A7YF47, A9QMC7, B2CS86, B2CS87, D5L6I2, G8CQJ8, G8CQL5, G8CVC9, K4MK58, Q3L225, Q5QHY1, Q6Q6D7, Q6TC59, Q77K11, Q91HB4, Q9J4M0, Q9QPD0
      Conserved Domains (2) summary
      pfam02407
      Location:16 → 100
      Viral_Rep; Putative viral replication protein
      pfam00910
      Location:171 → 256
      RNA_helicase; RNA helicase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    7LAR_A.1
    7LAR_B.1
    7LAR_C.1
    7LAR_D.1
    7LAR_E.1
    7LAR_F.1
    7LAS_A.1
    7LAS_B.1
    7LAS_C.1
    7LAS_D.1
    7LAS_E.1
    7LAS_F.1

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