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    BWS35_gp1 polyprotein [ Biomphalaria virus 3 ]

    Gene ID: 30854015, updated on 17-Aug-2018

    Summary

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    Gene symbol
    BWS35_gp1
    Gene description
    polyprotein
    Locus tag
    BWS35_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Biomphalaria virus 3 (nat-host: Biomphalaria glabrata)
    Lineage
    Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; unclassified Picornavirales
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    Genomic context

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    Sequence:
    NC_032840.1 (620..9178)

    NC_032840.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032840.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. First characterization of viruses from freshwater snails of the genus Biomphalaria, the intermediate host of the parasite Schistosoma mansoni. Galinier R, et al. Acta Trop, 2017 Mar. PMID 28012902

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    polyprotein
    YP_009336711.1
    • BV3_gp1; contains capsid proteins, helicase, protease and RNA-dependent RNA polymerase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_032840.1 Reference assembly

      Range
      620..9178
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009336711.1 polyprotein [Biomphalaria virus 3]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1L6UW53
      Conserved Domains (3) summary
      cd00205
      Location:642 → 786
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      pfam00910
      Location:1306 → 1407
      RNA_helicase; RNA helicase
      cl02808
      Location:2180 → 2515
      RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...
    Nucleotide Protein
    Heading Accession and Version

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