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    Obp19c Odorant-binding protein 19c [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33039, updated on 10-May-2024

    Summary

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    Official Symbol
    Obp19cprovided by FlyBase
    Official Full Name
    Odorant-binding protein 19cprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031111
    Locus tag
    Dmel_CG15457
    See related
    AllianceGenome:FB:FBgn0031111
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    19c; CG15457; DmelObp19c; Dmel\CG15457
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. Is expressed in adult labral sense organ; dorsal cibarial sense organ; embryonic antennal sense organ; and ventral cibarial sense organ. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

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    See Obp19c in Genome Data Viewer
    Location:
    19D1-19D1; 1-64 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (20417921..20418964, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (20288948..20289991, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 19a Neighboring gene Odorant-binding protein 19b Neighboring gene Odorant-binding protein 19d Neighboring gene Protein phosphatase 19C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Natural variation, functional pleiotropy and transcriptional contexts of odorant binding protein genes in Drosophila melanogaster. Arya GH, et al. Genetics, 2010 Dec. PMID 20870963, Free PMC Article
    2. Chemosensation and Evolution of Drosophila Host Plant Selection. Anholt RRH. iScience, 2020 Jan 24. PMID 31923648, Free PMC Article
    3. Time series transcriptome analysis implicates the circadian clock in the Drosophila melanogaster female's response to sex peptide. Delbare SYN, et al. Proc Natl Acad Sci U S A, 2023 Jan 31. PMID 36706221, Free PMC Article
    4. A large family of divergent Drosophila odorant-binding proteins expressed in gustatory and olfactory sensilla. Galindo K, et al. Genetics, 2001 Nov. PMID 11729153, Free PMC Article
    5. The odorant-binding proteins of Drosophila melanogaster: annotation and characterization of a divergent gene family. Graham LA, et al. Gene, 2002 Jun 12. PMID 12119098

    See all (41) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 19c
    Names
    CG15457-PA
    CG15457-PC
    Obp19c-PA
    Obp19c-PC
    odorant binding protein 19c

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      20417921..20418964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134548.2 → NP_608392.1  Odorant-binding protein 19c, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608392.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E2DBT6, E2DBU7, E2DC56, Q9VR96
      Related
      FBpp0077018
      Conserved Domains (1) summary
      smart00708
      Location:65 → 164
      PhBP; Insect pheromone/odorant binding protein domains

    2. NM_167701.2 → NP_728340.2  Odorant-binding protein 19c, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728340.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      E2DBT6, E2DBU7, E2DC56, Q9VR96
      Conserved Domains (1) summary
      smart00708
      Location:65 → 164
      PhBP; Insect pheromone/odorant binding protein domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VR96 Q9VR96

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