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    Cfap276 cilia and flagella associated protein 276 [ Mus musculus (house mouse) ]

    Gene ID: 75504, updated on 4-Jun-2024

    Summary

    Official Symbol
    Cfap276provided by MGI
    Official Full Name
    cilia and flagella associated protein 276provided by MGI
    Primary source
    MGI:MGI:1922754
    See related
    Ensembl:ENSMUSG00000027886 AllianceGenome:MGI:1922754
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700013F07Rik
    Summary
    Predicted to enable heme binding activity and heme transmembrane transporter activity. Predicted to be involved in heme export. Predicted to be located in cytoplasm and cytoskeleton. Is expressed in several structures, including gastrocnemius muscle; lung; and nervous system. Used to study Charcot-Marie-Tooth disease intermediate type. Orthologous to human CFAP276 (cilia and flagella associated protein 276). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 240.4) See more
    Orthologs
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    Genomic context

    See Cfap276 in Genome Data Viewer
    Location:
    3 F3; 3 47.27 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (108444900..108452013)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (108537584..108544697)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene seryl-tRNA synthetase 1 Neighboring gene STARR-positive B cell enhancer mm9_chr3:108248013-108248314 Neighboring gene predicted gene, 22942 Neighboring gene STARR-seq mESC enhancer starr_08688 Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator 1 Neighboring gene predicted gene, 23336 Neighboring gene STARR-seq mESC enhancer starr_08689 Neighboring gene STARR-positive B cell enhancer ABC_E4574 Neighboring gene STARR-positive B cell enhancer ABC_E2679 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:108365309-108365496 Neighboring gene small Cajal body-specific RNA 2 Neighboring gene transmembrane protein 167B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General protein information

    Preferred Names
    cilia- and flagella-associated protein 276
    Names
    protein C1orf194 homolog
    protein CFAP276
    uncharacterized protein C1orf194 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029314.1NP_083590.1  cilia- and flagella-associated protein 276

      See identical proteins and their annotated locations for NP_083590.1

      Status: PROVISIONAL

      Source sequence(s)
      BC116223
      Consensus CDS
      CCDS51046.1
      UniProtKB/Swiss-Prot
      Q9DAD0
      Related
      ENSMUSP00000029485.6, ENSMUST00000029485.6
      Conserved Domains (1) summary
      pfam12494
      Location:36124
      DUF3695; Protein of unknown function (DUF3695)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      108444900..108452013
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)