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    LOC8265099 histone acetyltransferase type B catalytic subunit [ Ricinus communis (castor bean) ]

    Gene ID: 8265099, updated on 25-Jan-2024

    Summary

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    Gene symbol
    LOC8265099
    Gene description
    histone acetyltransferase type B catalytic subunit
    Locus tag
    RCOM_1048220
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
    Also known as
    AT5G56740
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    Genomic context

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    See LOC8265099 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 3 NC_063258.1 (27996072..28000328, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994288.1 (696362..700599)

    Chromosome 3 - NC_063258.1Genomic Context describing neighboring genes Neighboring gene zinc protease PQQL-like Neighboring gene uncharacterized LOC8265100 Neighboring gene small nucleolar RNA R24 Neighboring gene 60S ribosomal protein L28-2 Neighboring gene small nucleolar RNA R24

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Resolution of deep eudicot phylogeny and their temporal diversification using nuclear genes from transcriptomic and genomic datasets. Zeng L, et al. New Phytol, 2017 May. PMID 28294342

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H4 acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in subtelomeric heterochromatin formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone acetyltransferase type B catalytic subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063258.1 Reference ASM1957865v1

      Range
      27996072..28000328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002514124.4 → XP_002514170.1  histone acetyltransferase type B catalytic subunit

      See identical proteins and their annotated locations for XP_002514170.1

      UniProtKB/TrEMBL
      B9RKC6
      Conserved Domains (2) summary
      cd04301
      Location:224 → 269
      NAT_SF; N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate
      pfam10394
      Location:30 → 197
      Hat1_N; Histone acetyl transferase HAT1 N-terminus
    Nucleotide Protein
    Heading Accession and Version

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