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    SCHCODRAFT_02625409 COX5B-domain-containing protein [ Schizophyllum commune H4-8 ]

    Gene ID: 9589968, updated on 17-May-2024

    Summary

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    Gene symbol
    SCHCODRAFT_02625409
    Gene description
    COX5B-domain-containing protein
    Primary source
    FungiDB:SCHCODRAFT_02625409
    Locus tag
    SCHCODRAFT_02625409
    See related
    VEuPathDB:SCHCODRAFT_02625409
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizophyllum commune H4-8 (strain: H4-8)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
    Old locus tag
    SCHCODRAFT_68145
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    Genomic context

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    See SCHCODRAFT_02625409 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_026089543.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene alpha/beta-hydrolase Neighboring gene UbiA-domain-containing protein Neighboring gene FAD/NAD(P)-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026089543.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
    2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of mitochondrial respiratory chain complex IV IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    COX5B-domain-containing protein
    XP_003032331.1
    • COX5B-domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_026089543.1 Reference assembly

      Range
      673965..674685
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003032285.2 → XP_003032331.1  COX5B-domain-containing protein [Schizophyllum commune H4-8]

      See identical proteins and their annotated locations for XP_003032331.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D8Q5K7
      Conserved Domains (1) summary
      pfam01215
      Location:23 → 142
      COX5B; Cytochrome c oxidase subunit Vb
    Nucleotide Protein
    Heading Accession and Version

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