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    AFM afamin [ Equus caballus (horse) ]

    Gene ID: 100055671, updated on 8-Mar-2024

    Summary

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    Official Symbol
    AFMprovided by VGNC
    Official Full Name
    afaminprovided by VGNC
    Primary source
    VGNC:VGNC:15149
    See related
    Ensembl:ENSECAG00000022497
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 3 NC_009146.3 (63930303..63951894, complement)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 3 NC_009146.2 (62148625..62170303, complement)

    Chromosome 3 - NC_009146.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111772888 Neighboring gene Ras association domain family member 6 Neighboring gene alpha-fetoprotein Neighboring gene alpha fetoprotein Neighboring gene albumin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables vitamin E binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport within extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vitamin transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in blood microparticle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    afamin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009146.3 Reference EquCab3.0 Primary Assembly

      Range
      63930303..63951894 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014738835.2 → XP_014594321.1  afamin isoform X2

      Conserved Domains (1) summary
      pfam00273
      Location:345 → 521
      Serum_albumin; Serum albumin family

    2. XM_001489747.4 → XP_001489797.1  afamin isoform X1

      See identical proteins and their annotated locations for XP_001489797.1

      UniProtKB/TrEMBL
      F7B3I5
      Related
      ENSECAP00000019964.2, ENSECAT00000024055.4
      Conserved Domains (1) summary
      pfam00273
      Location:414 → 590
      Serum_albumin; Serum albumin family
    Nucleotide Protein
    Heading Accession and Version

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