U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Orc4 origin recognition complex subunit 4 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100689043, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Orc4
    Gene description
    origin recognition complex subunit 4
    Locus tag
    I79_015955
    See related
    Ensembl:ENSCGRG00015013357
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Also known as
    ORC4L
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 6
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614483.1 (241380..282901, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (125337937..125378312)

    NW_003614483.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim23-like Neighboring gene activin A receptor type 2A Neighboring gene uncharacterized LOC103164178 Neighboring gene methyl-CpG binding domain protein 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Chinese hamster ORC subunits dynamically associate with chromatin throughout the cell-cycle. McNairn AJ, et al. Exp Cell Res, 2005 Aug 15. PMID 15950218, Free PMC Article
    2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA replication origin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA replication initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear origin of replication recognition complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    origin recognition complex subunit 4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001271425.1 → NP_001258354.1  origin recognition complex subunit 4

      See identical proteins and their annotated locations for NP_001258354.1

      Status: PROVISIONAL

      Source sequence(s)
      AFTD01073992
      UniProtKB/Swiss-Prot
      Q4U3P8
      Related
      ENSCGRP00015017449.1, ENSCGRT00015021440.2
      Conserved Domains (2) summary
      COG1474
      Location:43 → 226
      CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
      pfam14629
      Location:228 → 415
      ORC4_C; Origin recognition complex (ORC) subunit 4 C-terminus

    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614483.1 Reference CriGri_1.0 Primary Assembly

      Range
      241380..282901 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007648744.4 → XP_007646934.2  origin recognition complex subunit 4 isoform X1

      UniProtKB/Swiss-Prot
      Q4U3P8
      Conserved Domains (2) summary
      COG1474
      Location:43 → 226
      CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
      pfam14629
      Location:228 → 415
      ORC4_C; Origin recognition complex (ORC) subunit 4 C-terminus

    2. XM_007648746.4 → XP_007646936.1  origin recognition complex subunit 4 isoform X2

      UniProtKB/TrEMBL
      A0A8C2LB21
      Conserved Domains (3) summary
      cd00009
      Location:63 → 230
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      smart00382
      Location:78 → 234
      AAA; ATPases associated with a variety of cellular activities
      pfam14629
      Location:245 → 422
      ORC4_C; Origin recognition complex (ORC) subunit 4 C-terminus

    3. XM_007648747.3 → XP_007646937.1  origin recognition complex subunit 4 isoform X1

      See identical proteins and their annotated locations for XP_007646937.1

      UniProtKB/Swiss-Prot
      Q4U3P8
      Conserved Domains (2) summary
      COG1474
      Location:43 → 226
      CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
      pfam14629
      Location:228 → 415
      ORC4_C; Origin recognition complex (ORC) subunit 4 C-terminus

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048599.1 Alternate CriGri-PICRH-1.0

      Range
      125337937..125378312
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q4U3P8.1 GenPept UniProtKB/Swiss-Prot:Q4U3P8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.