U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC102573746 guanylate-binding protein 1 [ Alligator mississippiensis (American alligator) ]

    Gene ID: 102573746, updated on 23-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC102573746
    Gene description
    guanylate-binding protein 1
    Locus tag
    Y1Q_0019441
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Alligator mississippiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
    Also known as
    GBP1
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 15
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current rAllMis1 (GCF_030867095.1) 15 NC_081838.1 (30852447..30858531)
    102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714237.1 (34420..40495, complement)

    Chromosome 15 - NC_081838.1Genomic Context describing neighboring genes Neighboring gene guanylate-binding protein 1 Neighboring gene guanylate-binding protein 1 Neighboring gene adenosine receptor A1-like Neighboring gene ribosomal protein S19

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    guanylate-binding protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAllMis1 Primary Assembly

    Genomic

    1. NC_081838.1 Reference rAllMis1 Primary Assembly

      Range
      30852447..30858531
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006270267.4 → XP_006270329.1  guanylate-binding protein 1

      UniProtKB/TrEMBL
      A0A151M1E6
      Conserved Domains (3) summary
      pfam02841
      Location:282 → 576
      GBP_C; Guanylate-binding protein, C-terminal domain
      cd16269
      Location:288 → 576
      GBP_C; Guanylate-binding protein, C-terminal domain
      cl21455
      Location:19 → 279
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. XM_019480137.2 → XP_019335682.1  guanylate-binding protein 1

      UniProtKB/TrEMBL
      A0A151M1E6
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.