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    Ttn titin [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

    Gene ID: 102922944, updated on 10-Mar-2024

    Summary

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    Gene symbol
    Ttn
    Gene description
    titin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Peromyscus maniculatus bairdii (sub-species: bairdii)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    318
    Annotation release Status Assembly Chr Location
    102 current HU_Pman_2.1.3 (GCF_003704035.1) 4 NC_056011.1 (54006501..54281289, complement)
    101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501058.1 (10003954..10282857, complement)

    Chromosome 4 - NC_056011.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A3 Neighboring gene FKBP prolyl isomerase 7 Neighboring gene titin-like Neighboring gene uncharacterized LOC121828702 Neighboring gene uncharacterized LOC121828703 Neighboring gene coiled-coil domain containing 141 Neighboring gene nucleophosmin-like Neighboring gene SEC14 and spectrin domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    titin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HU_Pman_2.1.3 Primary Assembly

    Genomic

    1. NC_056011.1 Reference HU_Pman_2.1.3 Primary Assembly

      Range
      54006501..54281289 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042275516.1 → XP_042131450.1  titin isoform X1

      UniProtKB/TrEMBL
      A0A6J0CNG8
      Conserved Domains (13) summary
      cd05747
      Location:32624 → 32715
      IgI_Titin_like; Immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins; member of the I-set of Ig superfamily (IgSF) domains
      PTZ00121
      Location:32533 → 33168
      PTZ00121; MAEBL; Provisional
      smart00408
      Location:27644 → 27709
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:15565 → 15649
      FN3; Fibronectin type 3 domain
      smart00409
      Location:950 → 1032
      IG; Immunoglobulin
      smart00410
      Location:3748 → 3830
      IG_like; Immunoglobulin like
      COG0810
      Location:10413 → 10497
      TonB; Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis]
      COG2268
      Location:455 → 665
      YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
      PRK10819
      Location:10778 → 10867
      PRK10819; transport protein TonB; Provisional
      cd00063
      Location:24969 → 25061
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14104
      Location:31317 → 31593
      STKc_Titin; Catalytic domain of the Giant Serine/Threonine Kinase Titin
      cd00096
      Location:3758 → 3762
      Ig; Ig strand B [structural motif]
      cl11960
      Location:29122 → 29204
      Ig; Immunoglobulin domain

    2. XM_042275518.1 → XP_042131452.1  titin isoform X3

      UniProtKB/TrEMBL
      A0A6J0CLU5
      Conserved Domains (13) summary
      cd05747
      Location:33540 → 33631
      IgI_Titin_like; Immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins; member of the I-set of Ig superfamily (IgSF) domains
      PTZ00121
      Location:33449 → 34084
      PTZ00121; MAEBL; Provisional
      smart00408
      Location:28560 → 28625
      IGc2; Immunoglobulin C-2 Type
      smart00060
      Location:16481 → 16565
      FN3; Fibronectin type 3 domain
      smart00409
      Location:950 → 1032
      IG; Immunoglobulin
      smart00410
      Location:4616 → 4698
      IG_like; Immunoglobulin like
      COG0810
      Location:11245 → 11329
      TonB; Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis]
      COG2268
      Location:455 → 665
      YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
      PRK10819
      Location:11694 → 11783
      PRK10819; transport protein TonB; Provisional
      cd00063
      Location:25885 → 25977
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14104
      Location:32233 → 32509
      STKc_Titin; Catalytic domain of the Giant Serine/Threonine Kinase Titin
      cd00096
      Location:4626 → 4630
      Ig; Ig strand B [structural motif]
      cl11960
      Location:30038 → 30120
      Ig; Immunoglobulin domain

    3. XM_042275517.1 → XP_042131451.1  titin isoform X2

      UniProtKB/TrEMBL
      A0A6I9L3R9
      Conserved Domains (8) summary
      smart00408
      Location:3519 → 3586
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:950 → 1032
      IG; Immunoglobulin
      smart00410
      Location:4166 → 4249
      IG_like; Immunoglobulin like
      PHA03247
      Location:235 → 365
      PHA03247; large tegument protein UL36; Provisional
      COG2268
      Location:455 → 665
      YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
      NF033178
      Location:4958 → 5054
      auto_BigA; autotransporter adhesin BigA
      cd00096
      Location:4177 → 4181
      Ig; Ig strand B [structural motif]
      cl11960
      Location:1725 → 1797
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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