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    fanca FA complementation group A [ Xiphophorus maculatus (southern platyfish) ]

    Gene ID: 111612345, updated on 15-Mar-2024

    Summary

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    Gene symbol
    fanca
    Gene description
    FA complementation group A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xiphophorus maculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
    Orthologs
    zebrafish all
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    Genomic context

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    See fanca in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    41
    Annotation release Status Assembly Chr Location
    102 current X_maculatus-5.0-male (GCF_002775205.1) 2 NC_036444.1 (41734..74548)

    Chromosome 2 - NC_036444.1Genomic Context describing neighboring genes Neighboring gene charged multivesicular body protein 1A Neighboring gene solute carrier family 10 member 3 Neighboring gene zinc finger protein 276 Neighboring gene VPS9 domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036444.1 Chromosome 2 Reference X_maculatus-5.0-male Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Fanconi anaemia nuclear complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Fanconi anemia group A protein
    Names
    Fanconi anemia complementation group A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference X_maculatus-5.0-male Primary Assembly

    Genomic

    1. NC_036444.1 Reference X_maculatus-5.0-male Primary Assembly

      Range
      41734..74548
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023353483.1 → XP_023209251.1  Fanconi anemia group A protein isoform X8

      Conserved Domains (1) summary
      pfam15865
      Location:171 → 494
      Fanconi_A_N; Fanconi anaemia group A protein N terminus

    2. XM_023353479.1 → XP_023209247.1  Fanconi anemia group A protein isoform X7

      Conserved Domains (1) summary
      pfam15865
      Location:171 → 494
      Fanconi_A_N; Fanconi anaemia group A protein N terminus

    3. XM_023353452.1 → XP_023209220.1  Fanconi anemia group A protein isoform X3

      Conserved Domains (1) summary
      pfam15865
      Location:171 → 494
      Fanconi_A_N; Fanconi anaemia group A protein N terminus

    4. XM_023353440.1 → XP_023209208.1  Fanconi anemia group A protein isoform X1

      Conserved Domains (1) summary
      pfam15865
      Location:171 → 494
      Fanconi_A_N; Fanconi anaemia group A protein N terminus

    5. XM_023353468.1 → XP_023209236.1  Fanconi anemia group A protein isoform X5

      Conserved Domains (1) summary
      pfam15865
      Location:171 → 494
      Fanconi_A_N; Fanconi anaemia group A protein N terminus

    6. XM_023353473.1 → XP_023209241.1  Fanconi anemia group A protein isoform X6

      Conserved Domains (1) summary
      pfam15865
      Location:171 → 494
      Fanconi_A_N; Fanconi anaemia group A protein N terminus

    7. XM_023353448.1 → XP_023209216.1  Fanconi anemia group A protein isoform X2

      Conserved Domains (1) summary
      pfam15865
      Location:170 → 493
      Fanconi_A_N; Fanconi anaemia group A protein N terminus

    8. XM_023353460.1 → XP_023209228.1  Fanconi anemia group A protein isoform X4

      Conserved Domains (1) summary
      pfam15865
      Location:160 → 483
      Fanconi_A_N; Fanconi anaemia group A protein N terminus

    9. XM_023353485.1 → XP_023209253.1  Fanconi anemia group A protein isoform X9

      Conserved Domains (1) summary
      pfam15865
      Location:12 → 234
      Fanconi_A_N; Fanconi anaemia group A protein N terminus
    Nucleotide Protein Strain
    Heading Accession and Version

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