U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    cox1 cytochrome c oxidase subunit 1 [ Clathrina clathrus ]

    Gene ID: 15332554, updated on 27-Aug-2016

    Summary

    Go to the top of the page Help
    Gene symbol
    cox1
    Gene description
    cytochrome c oxidase subunit 1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Clathrina clathrus
    Lineage
    Eukaryota; Metazoa; Porifera; Calcarea; Calcinea; Clathrinida; Clathrinidae; Clathrina
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 5
    Sequence:
    Chromosome: MT5; NC_021113.1 (3428..4849)

    Chromosome MT5 - NC_021113.1Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene NADH dehydrogenase subunit 3 Neighboring gene NADH dehydrogenase subunit 2 Neighboring gene ATP synthase F0 subunit 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_021113.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Mitochondrial DNA of Clathrina clathrus (Calcarea, Calcinea): six linear chromosomes, fragmented rRNAs, tRNA editing, and a novel genetic code. Lavrov DV, et al. Mol Biol Evol, 2013 Apr. PMID 23223758

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Names
    cytochrome c oxidase subunit 1
    YP_007890315.1
    • start codon not determined

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_021113.1 Reference assembly

      Range
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_007890315.1 cytochrome c oxidase subunit 1, partial (mitochondrion) [Clathrina clathrus]

      See identical proteins and their annotated locations for YP_007890315.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      L0HTE7
      Conserved Domains (2) summary
      pfam00115
      Location:14 → 439
      COX1; Cytochrome C and Quinol oxidase polypeptide I
      cl00275
      Location:10 → 439
      Heme_Cu_Oxidase_I; Heme-copper oxidase subunit I. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is ...
    Nucleotide Protein
    Heading Accession and Version