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    Mbl2 mannose-binding lectin (protein C) 2 [ Mus musculus (house mouse) ]

    Gene ID: 17195, updated on 11-Apr-2024

    Summary

    Official Symbol
    Mbl2provided by MGI
    Official Full Name
    mannose-binding lectin (protein C) 2provided by MGI
    Primary source
    MGI:MGI:96924
    See related
    Ensembl:ENSMUSG00000024863 AllianceGenome:MGI:96924
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MBL; L-MBP; MBL-C; MBP-C; RARF/P28A
    Summary
    Predicted to enable several functions, including calcium-dependent protein binding activity; identical protein binding activity; and mannose binding activity. Acts upstream of or within defense response to other organism and positive regulation of phagocytosis. Located in extracellular space. Is expressed in embryo. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); bacterial infectious disease (multiple); fungal infectious disease (multiple); liver disease (multiple); and lung disease (multiple). Orthologous to human MBL2 (mannose binding lectin 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in liver adult (RPKM 158.5), liver E18 (RPKM 28.1) and 1 other tissue See more
    Orthologs
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    Genomic context

    Location:
    19 C1; 19 25.14 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (30210306..30217087)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (30232906..30239687)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene ubiquitin-like, containing PHD and RING finger domains 2 Neighboring gene glycine decarboxylase Neighboring gene ribosomal protein L31, pseudogene 20 Neighboring gene STARR-seq mESC enhancer starr_45905 Neighboring gene STARR-seq mESC enhancer starr_45906 Neighboring gene STARR-seq mESC enhancer starr_45907 Neighboring gene STARR-seq mESC enhancer starr_45908 Neighboring gene STARR-seq mESC enhancer starr_45909 Neighboring gene protein dpy-30 homolog Neighboring gene predicted gene, 36319

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1)  1 citation
    • Endonuclease-mediated (4) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calcium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables calcium-dependent protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables galactose binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables mannose binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables phosphatidylinositol-4-phosphate binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protease binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables signaling receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in antiviral innate immune response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cell surface pattern recognition receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within complement activation, classical pathway IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within complement activation, lectin pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within complement activation, lectin pathway IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within complement activation, lectin pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within complement activation, lectin pathway ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within defense response to Gram-positive bacterium IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within defense response to Gram-positive bacterium ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within immune system process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in innate immune response ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within killing by host of symbiont cells IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in negative regulation of viral process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of complement activation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of opsonization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of phagocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within positive regulation of phagocytosis IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of protein processing ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in proteolysis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in surfactant homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of collagen trimer IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in multivesicular body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of serine-type endopeptidase complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    mannose-binding protein C
    Names
    RA-reactive factor P28A subunit
    mannan-binding protein
    mannose binding lectin, liver (C)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001365058.1NP_001351987.1  mannose-binding protein C precursor

      Status: VALIDATED

      Source sequence(s)
      AC157986
      Consensus CDS
      CCDS29742.1
      UniProtKB/Swiss-Prot
      P41317
      UniProtKB/TrEMBL
      Q3UEK1
      Conserved Domains (2) summary
      pfam01391
      Location:3693
      Collagen; Collagen triple helix repeat (20 copies)
      cl02432
      Location:132242
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    2. NM_010776.2NP_034906.1  mannose-binding protein C precursor

      See identical proteins and their annotated locations for NP_034906.1

      Status: VALIDATED

      Source sequence(s)
      AK149484, DV653788
      Consensus CDS
      CCDS29742.1
      UniProtKB/Swiss-Prot
      P41317
      UniProtKB/TrEMBL
      Q3UEK1
      Related
      ENSMUSP00000025797.6, ENSMUST00000025797.7
      Conserved Domains (2) summary
      pfam01391
      Location:3693
      Collagen; Collagen triple helix repeat (20 copies)
      cl02432
      Location:132242
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      30210306..30217087
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006526730.1XP_006526793.1  mannose-binding protein C isoform X1

      See identical proteins and their annotated locations for XP_006526793.1

      UniProtKB/Swiss-Prot
      P41317
      UniProtKB/TrEMBL
      Q3UEK1
      Conserved Domains (2) summary
      pfam01391
      Location:3693
      Collagen; Collagen triple helix repeat (20 copies)
      cl02432
      Location:132242
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain