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    PLBD2 phospholipase B domain containing 2 [ Bos taurus (cattle) ]

    Gene ID: 514347, updated on 8-Mar-2024

    Summary

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    Official Symbol
    PLBD2provided by VGNC
    Official Full Name
    phospholipase B domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:32979
    See related
    BGD:BT25456; Ensembl:ENSBTAG00000019040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    P76
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (61041380..61063716, complement)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene serine dehydratase like Neighboring gene serine dehydratase Neighboring gene uncharacterized LOC132342630 Neighboring gene uncharacterized LOC104974667 Neighboring gene uncharacterized LOC104974666 Neighboring gene deltex E3 ubiquitin ligase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biochemical characterization and lysosomal localization of the mannose-6-phosphate protein p76 (hypothetical protein LOC196463). Jensen AG, et al. Biochem J, 2007 Mar 15. PMID 17105447, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC134065

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phospholipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phospholipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative phospholipase B-like 2
    Names
    LAMA-like protein 2
    lamina ancestor homolog 2
    mannose-6-phosphate protein p76
    phospholipase B domain-containing protein 2
    NP_001039635.1
    XP_005217873.1
    XP_005217874.1
    XP_005217875.1
    XP_059731962.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046170.1 → NP_001039635.1  putative phospholipase B-like 2 precursor

      See identical proteins and their annotated locations for NP_001039635.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112461
      UniProtKB/Swiss-Prot
      Q2KIY5
      Related
      ENSBTAP00000025343.3, ENSBTAT00000025343.5
      Conserved Domains (1) summary
      pfam04916
      Location:81 → 584
      Phospholip_B; Phospholipase B

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      61041380..61063716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005217818.5 → XP_005217875.1  putative phospholipase B-like 2 isoform X3

      Conserved Domains (1) summary
      pfam04916
      Location:81 → 583
      Phospholip_B; Phospholipase B

    2. XM_005217817.5 → XP_005217874.1  putative phospholipase B-like 2 isoform X2

      Conserved Domains (1) summary
      pfam04916
      Location:81 → 626
      Phospholip_B; Phospholipase B

    3. XM_005217816.5 → XP_005217873.1  putative phospholipase B-like 2 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1N1J5
      Related
      ENSBTAP00000062939.1, ENSBTAT00000085887.2
      Conserved Domains (1) summary
      pfam04916
      Location:81 → 627
      Phospholip_B; Phospholipase B

    4. XM_059875979.1 → XP_059731962.1  putative phospholipase B-like 2 isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2KIY5.1 GenPept UniProtKB/Swiss-Prot:Q2KIY5

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