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    LOC591027 huntingtin [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 591027, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC591027
    Gene description
    huntingtin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
    Also known as
    hd
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    58
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145600.1 (2580088..2641603, complement)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003579030.1 (539..13365, complement)

    NW_022145600.1Genomic Context describing neighboring genes Neighboring gene drebrin-like protein A Neighboring gene transient receptor potential cation channel subfamily M member 1-like Neighboring gene uncharacterized LOC115923971 Neighboring gene single-minded homolog 2-like Neighboring gene AP-5 complex subunit sigma-1 Neighboring gene uncharacterized LOC100893591

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic comparison of huntingtin homologues reveals the appearance of a primitive polyQ in sea urchin. Tartari M, et al. Mol Biol Evol, 2008 Feb. PMID 18048403

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    huntingtin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145600.1 Reference Spur_5.0 Primary Assembly

      Range
      2580088..2641603 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030985339.1 → XP_030841199.1  huntingtin

      UniProtKB/TrEMBL
      A0A7M7NVL6, A4VAL3
      Conserved Domains (1) summary
      pfam12372
      Location:1437 → 1477
      DUF3652; Huntingtin protein region
    Nucleotide Protein
    Heading Accession and Version

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