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    LOC660347 cuticle protein [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 660347, updated on 12-Apr-2024

    Summary

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    Gene symbol
    LOC660347
    Gene description
    cuticle protein
    Locus tag
    TcasGA2_TC002434
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Also known as
    CPR27
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 1 NC_087394.1 (3722614..3723014, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG3 NC_007418.3 (29097547..29097947)

    Chromosome 1 - NC_087394.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC660166 Neighboring gene uncharacterized LOC660229 Neighboring gene titin Neighboring gene uncharacterized LOC135267909 Neighboring gene titin-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antifungal roles of adult-specific cuticular protein genes of the red flour beetle, Tribolium castaneum. Sirasoonthorn P, et al. J Invertebr Pathol, 2021 Nov. PMID 34606828
    2. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    3. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Antifungal roles of adult-specific cuticular protein genes of the red flour beetle, Tribolium castaneum.
      Title: Antifungal roles of adult-specific cuticular protein genes of the red flour beetle, Tribolium castaneum.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cuticle protein
    Names
    Cuticle protein 19-like Protein
    GLEAN_02434

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001293596.1 → NP_001280525.1  cuticle protein precursor

      See identical proteins and their annotated locations for NP_001280525.1

      Status: PROVISIONAL

      Source sequence(s)
      HQ634478
      UniProtKB/TrEMBL
      D6WIF2
      Conserved Domains (1) summary
      pfam00379
      Location:42 → 92
      Chitin_bind_4; Insect cuticle protein

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087394.1 Reference icTriCast1.1 Primary Assembly

      Range
      3722614..3723014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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