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    Ofd1 basal body protein [ Volvox carteri f. nagariensis ]

    Gene ID: 9618831, updated on 10-Jan-2024

    Summary

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    Gene symbol
    Ofd1
    Gene description
    basal body protein
    Locus tag
    VOLCADRAFT_90133
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    20

    NW_003307558.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003307558.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in epithelial cilium movement involved in determination of left/right asymmetry IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    basal body protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003307558.1 Reference assembly

      Range
      1371907..1382604
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002949614.1 → XP_002949660.1  basal body protein [Volvox carteri f. nagariensis]

      See identical proteins and their annotated locations for XP_002949660.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D8TTK1
      Conserved Domains (3) summary
      pfam16045
      Location:67 → 93
      LisH_2; LisH
      pfam16515
      Location:431 → 506
      HIP1_clath_bdg; Clathrin-binding domain of Huntingtin-interacting protein 1
      cl23720
      Location:226 → 312
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
    Nucleotide Protein
    Heading Accession and Version

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