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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10005231

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr4:153269737 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
T=0.297522 (78751/264690, TOPMED)
T=0.292289 (40886/139882, GnomAD)
T=0.24624 (7241/29406, ALFA) (+ 15 more)
T=0.03914 (656/16760, 8.3KJPN)
T=0.2572 (1288/5008, 1000G)
T=0.1998 (895/4480, Estonian)
T=0.1640 (632/3854, ALSPAC)
T=0.1726 (640/3708, TWINSUK)
T=0.0695 (203/2922, KOREAN)
T=0.3211 (605/1884, HapMap)
T=0.0797 (146/1832, Korea1K)
T=0.193 (193/998, GoNL)
T=0.160 (96/600, NorthernSweden)
T=0.190 (41/216, Qatari)
T=0.052 (11/212, Vietnamese)
C=0.414 (87/210, SGDP_PRJ)
T=0.25 (10/40, GENOME_DK)
C=0.44 (7/16, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
TRIM2 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 4 NC_000004.12:g.153269737C>T
GRCh37.p13 chr 4 NC_000004.11:g.154190889C>T
TRIM2 RefSeqGene NG_041788.1:g.121620C>T
Gene: TRIM2, tripartite motif containing 2 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
TRIM2 transcript variant 2 NM_001130067.2:c.-48-601C…

NM_001130067.2:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant 3 NM_001302692.2:c.31-598C>T N/A Intron Variant
TRIM2 transcript variant 4 NM_001302693.2:c.31-601C>T N/A Intron Variant
TRIM2 transcript variant 5 NM_001302694.2:c.4-598C>T N/A Intron Variant
TRIM2 transcript variant 6 NM_001351054.2:c.4-598C>T N/A Intron Variant
TRIM2 transcript variant 7 NM_001351055.2:c.4-601C>T N/A Intron Variant
TRIM2 transcript variant 8 NM_001351056.2:c.-48-601C…

NM_001351056.2:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant 9 NM_001351057.2:c.-527-598…

NM_001351057.2:c.-527-598C>T

N/A Intron Variant
TRIM2 transcript variant 10 NM_001375488.1:c.31-598C>T N/A Intron Variant
TRIM2 transcript variant 11 NM_001375489.1:c.31-601C>T N/A Intron Variant
TRIM2 transcript variant 12 NM_001375490.1:c.31-598C>T N/A Intron Variant
TRIM2 transcript variant 13 NM_001375491.1:c.31-601C>T N/A Intron Variant
TRIM2 transcript variant 14 NM_001375512.1:c.-48-601C…

NM_001375512.1:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant 15 NM_001375513.1:c.-48-601C…

NM_001375513.1:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant 16 NM_001375514.1:c.-48-601C…

NM_001375514.1:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant 17 NM_001375515.1:c.-51-598C…

NM_001375515.1:c.-51-598C>T

N/A Intron Variant
TRIM2 transcript variant 18 NM_001375516.1:c.-48-601C…

NM_001375516.1:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant 19 NM_001375517.1:c.-48-601C…

NM_001375517.1:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant 20 NM_001375519.1:c.31-598C>T N/A Intron Variant
TRIM2 transcript variant 21 NM_001375520.1:c.31-601C>T N/A Intron Variant
TRIM2 transcript variant 22 NM_001375522.1:c.-256-601…

NM_001375522.1:c.-256-601C>T

N/A Intron Variant
TRIM2 transcript variant 23 NM_001375523.1:c.-259-598…

NM_001375523.1:c.-259-598C>T

N/A Intron Variant
TRIM2 transcript variant 24 NM_001375525.1:c.-124-615…

NM_001375525.1:c.-124-6156C>T

N/A Intron Variant
TRIM2 transcript variant 1 NM_015271.5:c.31-598C>T N/A Intron Variant
TRIM2 transcript variant X1 XM_006714157.1:c.31-598C>T N/A Intron Variant
TRIM2 transcript variant X2 XM_006714158.1:c.31-601C>T N/A Intron Variant
TRIM2 transcript variant X4 XM_006714160.1:c.-51-598C…

XM_006714160.1:c.-51-598C>T

N/A Intron Variant
TRIM2 transcript variant X5 XM_006714161.1:c.-48-601C…

XM_006714161.1:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant X6 XM_006714162.1:c.-48-601C…

XM_006714162.1:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant X7 XM_011531795.1:c.-51-598C…

XM_011531795.1:c.-51-598C>T

N/A Intron Variant
TRIM2 transcript variant X17 XM_011531796.3:c.-51-598C…

XM_011531796.3:c.-51-598C>T

N/A Intron Variant
TRIM2 transcript variant X3 XM_017007943.1:c.31-601C>T N/A Intron Variant
TRIM2 transcript variant X8 XM_017007944.1:c.-51-598C…

XM_017007944.1:c.-51-598C>T

N/A Intron Variant
TRIM2 transcript variant X10 XM_017007946.2:c.4-598C>T N/A Intron Variant
TRIM2 transcript variant X11 XM_017007947.1:c.4-601C>T N/A Intron Variant
TRIM2 transcript variant X12 XM_017007948.2:c.-51-598C…

XM_017007948.2:c.-51-598C>T

N/A Intron Variant
TRIM2 transcript variant X13 XM_017007949.1:c.-48-601C…

XM_017007949.1:c.-48-601C>T

N/A Intron Variant
TRIM2 transcript variant X14 XM_017007950.1:c.-51-598C…

XM_017007950.1:c.-51-598C>T

N/A Intron Variant
TRIM2 transcript variant X20 XM_017007955.1:c.-524-601…

XM_017007955.1:c.-524-601C>T

N/A Intron Variant
TRIM2 transcript variant X18 XM_006714165.3:c. N/A Genic Upstream Transcript Variant
TRIM2 transcript variant X19 XM_017007953.2:c. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency (New)
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 29406 C=0.75376 T=0.24624
European Sub 19500 C=0.82179 T=0.17821
African Sub 4786 C=0.4595 T=0.5405
African Others Sub 160 C=0.388 T=0.613
African American Sub 4626 C=0.4620 T=0.5380
Asian Sub 172 C=0.988 T=0.012
East Asian Sub 112 C=0.982 T=0.018
Other Asian Sub 60 C=1.00 T=0.00
Latin American 1 Sub 314 C=0.745 T=0.255
Latin American 2 Sub 2826 C=0.7601 T=0.2399
South Asian Sub 110 C=0.918 T=0.082
Other Sub 1698 C=0.7585 T=0.2415


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 C=0.702478 T=0.297522
gnomAD - Genomes Global Study-wide 139882 C=0.707711 T=0.292289
gnomAD - Genomes European Sub 75818 C=0.82818 T=0.17182
gnomAD - Genomes African Sub 41852 C=0.45164 T=0.54836
gnomAD - Genomes American Sub 13620 C=0.74838 T=0.25162
gnomAD - Genomes Ashkenazi Jewish Sub 3312 C=0.7739 T=0.2261
gnomAD - Genomes East Asian Sub 3126 C=0.9424 T=0.0576
gnomAD - Genomes Other Sub 2154 C=0.7433 T=0.2567
8.3KJPN JAPANESE Study-wide 16760 C=0.96086 T=0.03914
1000Genomes Global Study-wide 5008 C=0.7428 T=0.2572
1000Genomes African Sub 1322 C=0.3979 T=0.6021
1000Genomes East Asian Sub 1008 C=0.9464 T=0.0536
1000Genomes Europe Sub 1006 C=0.8390 T=0.1610
1000Genomes South Asian Sub 978 C=0.882 T=0.118
1000Genomes American Sub 694 C=0.768 T=0.232
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.8002 T=0.1998
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.8360 T=0.1640
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.8274 T=0.1726
KOREAN population from KRGDB KOREAN Study-wide 2922 C=0.9305 T=0.0695
HapMap Global Study-wide 1884 C=0.6789 T=0.3211
HapMap American Sub 768 C=0.802 T=0.198
HapMap African Sub 692 C=0.393 T=0.607
HapMap Asian Sub 248 C=0.960 T=0.040
HapMap Europe Sub 176 C=0.869 T=0.131
Korean Genome Project KOREAN Study-wide 1832 C=0.9203 T=0.0797
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.807 T=0.193
Northern Sweden ACPOP Study-wide 600 C=0.840 T=0.160
Qatari Global Study-wide 216 C=0.810 T=0.190
A Vietnamese Genetic Variation Database Global Study-wide 212 C=0.948 T=0.052
SGDP_PRJ Global Study-wide 210 C=0.414 T=0.586
The Danish reference pan genome Danish Study-wide 40 C=0.75 T=0.25
Siberian Global Study-wide 16 C=0.44 T=0.56
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= T
GRCh38.p13 chr 4 NC_000004.12:g.153269737= NC_000004.12:g.153269737C>T
GRCh37.p13 chr 4 NC_000004.11:g.154190889= NC_000004.11:g.154190889C>T
TRIM2 RefSeqGene NG_041788.1:g.121620= NG_041788.1:g.121620C>T
TRIM2 transcript variant 2 NM_001130067.1:c.-48-601= NM_001130067.1:c.-48-601C>T
TRIM2 transcript variant 2 NM_001130067.2:c.-48-601= NM_001130067.2:c.-48-601C>T
TRIM2 transcript variant 3 NM_001302692.2:c.31-598= NM_001302692.2:c.31-598C>T
TRIM2 transcript variant 4 NM_001302693.2:c.31-601= NM_001302693.2:c.31-601C>T
TRIM2 transcript variant 5 NM_001302694.2:c.4-598= NM_001302694.2:c.4-598C>T
TRIM2 transcript variant 6 NM_001351054.2:c.4-598= NM_001351054.2:c.4-598C>T
TRIM2 transcript variant 7 NM_001351055.2:c.4-601= NM_001351055.2:c.4-601C>T
TRIM2 transcript variant 8 NM_001351056.2:c.-48-601= NM_001351056.2:c.-48-601C>T
TRIM2 transcript variant 9 NM_001351057.2:c.-527-598= NM_001351057.2:c.-527-598C>T
TRIM2 transcript variant 10 NM_001375488.1:c.31-598= NM_001375488.1:c.31-598C>T
TRIM2 transcript variant 11 NM_001375489.1:c.31-601= NM_001375489.1:c.31-601C>T
TRIM2 transcript variant 12 NM_001375490.1:c.31-598= NM_001375490.1:c.31-598C>T
TRIM2 transcript variant 13 NM_001375491.1:c.31-601= NM_001375491.1:c.31-601C>T
TRIM2 transcript variant 14 NM_001375512.1:c.-48-601= NM_001375512.1:c.-48-601C>T
TRIM2 transcript variant 15 NM_001375513.1:c.-48-601= NM_001375513.1:c.-48-601C>T
TRIM2 transcript variant 16 NM_001375514.1:c.-48-601= NM_001375514.1:c.-48-601C>T
TRIM2 transcript variant 17 NM_001375515.1:c.-51-598= NM_001375515.1:c.-51-598C>T
TRIM2 transcript variant 18 NM_001375516.1:c.-48-601= NM_001375516.1:c.-48-601C>T
TRIM2 transcript variant 19 NM_001375517.1:c.-48-601= NM_001375517.1:c.-48-601C>T
TRIM2 transcript variant 20 NM_001375519.1:c.31-598= NM_001375519.1:c.31-598C>T
TRIM2 transcript variant 21 NM_001375520.1:c.31-601= NM_001375520.1:c.31-601C>T
TRIM2 transcript variant 22 NM_001375522.1:c.-256-601= NM_001375522.1:c.-256-601C>T
TRIM2 transcript variant 23 NM_001375523.1:c.-259-598= NM_001375523.1:c.-259-598C>T
TRIM2 transcript variant 24 NM_001375525.1:c.-124-6156= NM_001375525.1:c.-124-6156C>T
TRIM2 transcript variant 1 NM_015271.3:c.31-598= NM_015271.3:c.31-598C>T
TRIM2 transcript variant 1 NM_015271.5:c.31-598= NM_015271.5:c.31-598C>T
TRIM2 transcript variant X1 XM_005262872.1:c.31-601= XM_005262872.1:c.31-601C>T
TRIM2 transcript variant X2 XM_005262873.1:c.4-601= XM_005262873.1:c.4-601C>T
TRIM2 transcript variant X3 XM_005262874.1:c.-48-601= XM_005262874.1:c.-48-601C>T
TRIM2 transcript variant X1 XM_006714157.1:c.31-598= XM_006714157.1:c.31-598C>T
TRIM2 transcript variant X2 XM_006714158.1:c.31-601= XM_006714158.1:c.31-601C>T
TRIM2 transcript variant X4 XM_006714160.1:c.-51-598= XM_006714160.1:c.-51-598C>T
TRIM2 transcript variant X5 XM_006714161.1:c.-48-601= XM_006714161.1:c.-48-601C>T
TRIM2 transcript variant X6 XM_006714162.1:c.-48-601= XM_006714162.1:c.-48-601C>T
TRIM2 transcript variant X7 XM_011531795.1:c.-51-598= XM_011531795.1:c.-51-598C>T
TRIM2 transcript variant X17 XM_011531796.3:c.-51-598= XM_011531796.3:c.-51-598C>T
TRIM2 transcript variant X3 XM_017007943.1:c.31-601= XM_017007943.1:c.31-601C>T
TRIM2 transcript variant X8 XM_017007944.1:c.-51-598= XM_017007944.1:c.-51-598C>T
TRIM2 transcript variant X10 XM_017007946.2:c.4-598= XM_017007946.2:c.4-598C>T
TRIM2 transcript variant X11 XM_017007947.1:c.4-601= XM_017007947.1:c.4-601C>T
TRIM2 transcript variant X12 XM_017007948.2:c.-51-598= XM_017007948.2:c.-51-598C>T
TRIM2 transcript variant X13 XM_017007949.1:c.-48-601= XM_017007949.1:c.-48-601C>T
TRIM2 transcript variant X14 XM_017007950.1:c.-51-598= XM_017007950.1:c.-51-598C>T
TRIM2 transcript variant X20 XM_017007955.1:c.-524-601= XM_017007955.1:c.-524-601C>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

63 SubSNP, 18 Frequency submissions
No Submitter Submission ID Date (Build)
1 WI_SSAHASNP ss13851112 Dec 05, 2003 (119)
2 ABI ss44488457 Mar 14, 2006 (126)
3 ILLUMINA ss74855127 Dec 07, 2007 (129)
4 AFFY ss76522057 Dec 07, 2007 (129)
5 HGSV ss77240750 Dec 07, 2007 (129)
6 HGSV ss84693128 Dec 15, 2007 (130)
7 HUMANGENOME_JCVI ss99022856 Feb 04, 2009 (130)
8 1000GENOMES ss110817166 Jan 25, 2009 (130)
9 ILLUMINA-UK ss117244367 Feb 14, 2009 (130)
10 KRIBB_YJKIM ss119610138 Dec 01, 2009 (131)
11 ENSEMBL ss143501561 Dec 01, 2009 (131)
12 COMPLETE_GENOMICS ss164736981 Jul 04, 2010 (132)
13 COMPLETE_GENOMICS ss167313796 Jul 04, 2010 (132)
14 ILLUMINA ss169493469 Jul 04, 2010 (132)
15 BUSHMAN ss199366752 Jul 04, 2010 (132)
16 1000GENOMES ss221297616 Jul 14, 2010 (132)
17 1000GENOMES ss232661145 Jul 14, 2010 (132)
18 1000GENOMES ss239895068 Jul 15, 2010 (132)
19 GMI ss277995299 May 04, 2012 (137)
20 PJP ss293227662 May 09, 2011 (134)
21 ILLUMINA ss536564402 Sep 08, 2015 (146)
22 TISHKOFF ss557954675 Apr 25, 2013 (138)
23 SSMP ss651775647 Apr 25, 2013 (138)
24 EVA-GONL ss980849483 Aug 21, 2014 (142)
25 JMKIDD_LAB ss1072083676 Aug 21, 2014 (142)
26 1000GENOMES ss1312465278 Aug 21, 2014 (142)
27 DDI ss1430103208 Apr 01, 2015 (144)
28 EVA_GENOME_DK ss1580841885 Apr 01, 2015 (144)
29 EVA_DECODE ss1590362718 Apr 01, 2015 (144)
30 EVA_UK10K_ALSPAC ss1611514544 Apr 01, 2015 (144)
31 EVA_UK10K_TWINSUK ss1654508577 Apr 01, 2015 (144)
32 EVA_SVP ss1712716856 Apr 01, 2015 (144)
33 HAMMER_LAB ss1802419221 Sep 08, 2015 (146)
34 WEILL_CORNELL_DGM ss1924088416 Feb 12, 2016 (147)
35 GENOMED ss1969909668 Jul 19, 2016 (147)
36 JJLAB ss2022629843 Sep 14, 2016 (149)
37 ILLUMINA ss2095150820 Dec 20, 2016 (150)
38 USC_VALOUEV ss2150762911 Dec 20, 2016 (150)
39 HUMAN_LONGEVITY ss2268480420 Dec 20, 2016 (150)
40 TOPMED ss2436417580 Dec 20, 2016 (150)
41 GRF ss2706260587 Nov 08, 2017 (151)
42 GNOMAD ss2817133704 Nov 08, 2017 (151)
43 SWEGEN ss2995817857 Nov 08, 2017 (151)
44 BIOINF_KMB_FNS_UNIBA ss3025091828 Nov 08, 2017 (151)
45 CSHL ss3346035473 Nov 08, 2017 (151)
46 TOPMED ss3447072471 Nov 08, 2017 (151)
47 ILLUMINA ss3629096703 Oct 12, 2018 (152)
48 ILLUMINA ss3638519509 Oct 12, 2018 (152)
49 ILLUMINA ss3643468344 Oct 12, 2018 (152)
50 URBANLAB ss3647885637 Oct 12, 2018 (152)
51 ILLUMINA ss3652917995 Oct 12, 2018 (152)
52 EGCUT_WGS ss3663727226 Jul 13, 2019 (153)
53 EVA_DECODE ss3713375392 Jul 13, 2019 (153)
54 ACPOP ss3731747526 Jul 13, 2019 (153)
55 EVA ss3762607363 Jul 13, 2019 (153)
56 KHV_HUMAN_GENOMES ss3805766275 Jul 13, 2019 (153)
57 EVA ss3828888220 Apr 26, 2020 (154)
58 SGDP_PRJ ss3860396062 Apr 26, 2020 (154)
59 KRGDB ss3906746645 Apr 26, 2020 (154)
60 KOGIC ss3955425736 Apr 26, 2020 (154)
61 EVA ss4017175654 Apr 26, 2021 (155)
62 TOPMED ss4637721711 Apr 26, 2021 (155)
63 TOMMO_GENOMICS ss5168743638 Apr 26, 2021 (155)
64 1000Genomes NC_000004.11 - 154190889 Oct 12, 2018 (152)
65 The Avon Longitudinal Study of Parents and Children NC_000004.11 - 154190889 Oct 12, 2018 (152)
66 Genetic variation in the Estonian population NC_000004.11 - 154190889 Oct 12, 2018 (152)
67 The Danish reference pan genome NC_000004.11 - 154190889 Apr 26, 2020 (154)
68 gnomAD - Genomes NC_000004.12 - 153269737 Apr 26, 2021 (155)
69 Genome of the Netherlands Release 5 NC_000004.11 - 154190889 Apr 26, 2020 (154)
70 HapMap NC_000004.12 - 153269737 Apr 26, 2020 (154)
71 KOREAN population from KRGDB NC_000004.11 - 154190889 Apr 26, 2020 (154)
72 Korean Genome Project NC_000004.12 - 153269737 Apr 26, 2020 (154)
73 Northern Sweden NC_000004.11 - 154190889 Jul 13, 2019 (153)
74 Qatari NC_000004.11 - 154190889 Apr 26, 2020 (154)
75 SGDP_PRJ NC_000004.11 - 154190889 Apr 26, 2020 (154)
76 Siberian NC_000004.11 - 154190889 Apr 26, 2020 (154)
77 8.3KJPN NC_000004.11 - 154190889 Apr 26, 2021 (155)
78 TopMed NC_000004.12 - 153269737 Apr 26, 2021 (155)
79 UK 10K study - Twins NC_000004.11 - 154190889 Oct 12, 2018 (152)
80 A Vietnamese Genetic Variation Database NC_000004.11 - 154190889 Jul 13, 2019 (153)
81 ALFA NC_000004.12 - 153269737 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs58375540 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss77240750, ss84693128 NC_000004.9:154548493:C:T NC_000004.12:153269736:C:T (self)
ss110817166, ss117244367, ss164736981, ss167313796, ss199366752, ss277995299, ss293227662, ss1590362718, ss1712716856, ss3643468344 NC_000004.10:154410338:C:T NC_000004.12:153269736:C:T (self)
23964764, 13327854, 9465474, 7006824, 5903077, 13924039, 5032391, 6130346, 12413042, 3279265, 26712945, 13327854, 2938725, ss221297616, ss232661145, ss239895068, ss536564402, ss557954675, ss651775647, ss980849483, ss1072083676, ss1312465278, ss1430103208, ss1580841885, ss1611514544, ss1654508577, ss1802419221, ss1924088416, ss1969909668, ss2022629843, ss2095150820, ss2150762911, ss2436417580, ss2706260587, ss2817133704, ss2995817857, ss3346035473, ss3629096703, ss3638519509, ss3652917995, ss3663727226, ss3731747526, ss3762607363, ss3828888220, ss3860396062, ss3906746645, ss4017175654, ss5168743638 NC_000004.11:154190888:C:T NC_000004.12:153269736:C:T (self)
169764925, 2737368, 11803737, 297009748, 475099267, 10802517234, ss2268480420, ss3025091828, ss3447072471, ss3647885637, ss3713375392, ss3805766275, ss3955425736, ss4637721711 NC_000004.12:153269736:C:T NC_000004.12:153269736:C:T (self)
ss44488457, ss74855127, ss76522057, ss99022856, ss119610138, ss143501561, ss169493469 NT_016354.19:78738609:C:T NC_000004.12:153269736:C:T (self)
ss13851112 NT_016606.16:15738944:C:T NC_000004.12:153269736:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs10005231

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad